Metadata-Version: 2.1
Name: cirtap
Version: 0.2.1
Summary: A CLI to handle PATRIC data from the FTP
Home-page: https://github.com/MGXlab/cirtap/
Author: papanikos
Author-email: nikos.c.pappas@gmail.com
License: MIT
Project-URL: Tracker, https://github.com/MGXlab/cirtap/issues
Project-URL: Documentation, https://github.com/MGXlab/cirtap/wiki
Platform: Linux
Classifier: Development Status :: 4 - Beta
Classifier: Programming Language :: Python :: 3
Classifier: Operating System :: POSIX :: Linux
Classifier: Topic :: Scientific/Engineering :: Bio-Informatics
Description-Content-Type: text/markdown; charset=UTF-8
Provides-Extra: testing
License-File: LICENSE.txt
License-File: AUTHORS.rst

# cirtap

A command-line utility to handle PATRIC data from their FTP

Check out the [wiki page](https://github.com/MGXlab/cirtap/wiki) for more info.

## Installation

```
$ pip install cirtap
```

## Usage

```
Usage: cirtap [OPTIONS] COMMAND [ARGS]...

Options:
  --version   Show the version and exit.
  -h, --help  Show this message and exit.

Commands:
  index   Create an index of contents for all directories
  mirror  Mirror all data from ftp.patricbrc.org in the specified DB_DIR
```

## Quickstart 

* Start a new mirror of all data in a local path, wiht 8 parallel downloads

```
$ cirtap mirror -j 8 some/path

```

* Resume a failing job

```
$ cirtap mirror -j 8 -r some/path
```

* Archive previous release notes and send notification emails when a mirror job launches or fails
to some users

```
$ cirtap mirror -j 8 --notify user1@example.com,user2@gmail.com --archive-notes some/path
```



