LICENSE
MANIFEST.in
Pipfile
README.md
setup.py
protgraph/__init__.py
protgraph/__main__.py
protgraph/aa_masses_annotation.py
protgraph/aa_replacer.py
protgraph/annotate_ptms.py
protgraph/cli.py
protgraph/digestion.py
protgraph/graph_collapse_edges.py
protgraph/graph_generator.py
protgraph/graph_statistics.py
protgraph/merge_aminoacids.py
protgraph/protgraph.py
protgraph/read_embl.py
protgraph/unexpected_exception.py
protgraph/verify_graphs.py
protgraph.egg-info/PKG-INFO
protgraph.egg-info/SOURCES.txt
protgraph.egg-info/dependency_links.txt
protgraph.egg-info/entry_points.txt
protgraph.egg-info/requires.txt
protgraph.egg-info/top_level.txt
protgraph/export/__init__.py
protgraph/export/abstract_exporter.py
protgraph/export/binary_pcsr.py
protgraph/export/cassandra.py
protgraph/export/csv.py
protgraph/export/dot.py
protgraph/export/exporters.py
protgraph/export/generic_file_exporter.py
protgraph/export/gml.py
protgraph/export/graphml.py
protgraph/export/gremlin.py
protgraph/export/large_binary_pcsr.py
protgraph/export/large_csv.py
protgraph/export/large_pcsr.py
protgraph/export/mysql.py
protgraph/export/pcsr.py
protgraph/export/pickle.py
protgraph/export/postgres.py
protgraph/export/redisgraph.py
protgraph/export/peptides/__init__.py
protgraph/export/peptides/abstract_peptide_exporter.py
protgraph/export/peptides/pep_citus.py
protgraph/export/peptides/pep_fasta.py
protgraph/export/peptides/pep_mysql.py
protgraph/export/peptides/pep_postgres.py
protgraph/export/peptides/pep_sqlite.py
protgraph/export/peptides/pep_trie.py
protgraph/ft_execution/__init__.py
protgraph/ft_execution/generic.py
protgraph/ft_execution/generic_cleaved_peptide.py
protgraph/ft_execution/init_met.py
protgraph/ft_execution/signal.py
protgraph/ft_execution/var_seq.py
protgraph/scripts/__init__.py
protgraph/scripts/compact_fasta.py
protgraph/scripts/generate_fasta_decoys.py
protgraph/scripts/pepsqlite_to_fasta.py
protgraph/scripts/print_sums.py
protgraph/scripts/replace_fasta_header.py