MANIFEST.in
README.md
setup.py
setup_clibs.py
amici/__init__.py
amici/__init__.template.py
amici/amici.py
amici/amici_without_hdf5.py
amici/amici_wrap.cxx
amici/amici_wrap_without_hdf5.cxx
amici/plotting.py
amici/sbml_import.py
amici/setup.template.py
amici/version.txt
amici.egg-info/PKG-INFO
amici.egg-info/SOURCES.txt
amici.egg-info/dependency_links.txt
amici.egg-info/not-zip-safe
amici.egg-info/requires.txt
amici.egg-info/top_level.txt
amici/ThirdParty/SuiteSparse/LICENSE.txt
amici/ThirdParty/SuiteSparse/AMD/Demo/amd_demo.c
amici/ThirdParty/SuiteSparse/AMD/Demo/amd_demo2.c
amici/ThirdParty/SuiteSparse/AMD/Demo/amd_f77wrapper.c
amici/ThirdParty/SuiteSparse/AMD/Demo/amd_l_demo.c
amici/ThirdParty/SuiteSparse/AMD/Demo/amd_simple.c
amici/ThirdParty/SuiteSparse/AMD/Include/amd.h
amici/ThirdParty/SuiteSparse/AMD/Include/amd_internal.h
amici/ThirdParty/SuiteSparse/AMD/MATLAB/amd_mex.c
amici/ThirdParty/SuiteSparse/AMD/Source/amd_1.c
amici/ThirdParty/SuiteSparse/AMD/Source/amd_2.c
amici/ThirdParty/SuiteSparse/AMD/Source/amd_aat.c
amici/ThirdParty/SuiteSparse/AMD/Source/amd_control.c
amici/ThirdParty/SuiteSparse/AMD/Source/amd_defaults.c
amici/ThirdParty/SuiteSparse/AMD/Source/amd_dump.c
amici/ThirdParty/SuiteSparse/AMD/Source/amd_global.c
amici/ThirdParty/SuiteSparse/AMD/Source/amd_info.c
amici/ThirdParty/SuiteSparse/AMD/Source/amd_order.c
amici/ThirdParty/SuiteSparse/AMD/Source/amd_post_tree.c
amici/ThirdParty/SuiteSparse/AMD/Source/amd_postorder.c
amici/ThirdParty/SuiteSparse/AMD/Source/amd_preprocess.c
amici/ThirdParty/SuiteSparse/AMD/Source/amd_valid.c
amici/ThirdParty/SuiteSparse/BTF/Include/btf.h
amici/ThirdParty/SuiteSparse/BTF/Include/btf_internal.h
amici/ThirdParty/SuiteSparse/BTF/MATLAB/btf.c
amici/ThirdParty/SuiteSparse/BTF/MATLAB/maxtrans.c
amici/ThirdParty/SuiteSparse/BTF/MATLAB/strongcomp.c
amici/ThirdParty/SuiteSparse/BTF/Source/btf_maxtrans.c
amici/ThirdParty/SuiteSparse/BTF/Source/btf_order.c
amici/ThirdParty/SuiteSparse/BTF/Source/btf_strongcomp.c
amici/ThirdParty/SuiteSparse/CAMD/Demo/camd_demo.c
amici/ThirdParty/SuiteSparse/CAMD/Demo/camd_demo2.c
amici/ThirdParty/SuiteSparse/CAMD/Demo/camd_l_demo.c
amici/ThirdParty/SuiteSparse/CAMD/Demo/camd_simple.c
amici/ThirdParty/SuiteSparse/CAMD/Include/camd.h
amici/ThirdParty/SuiteSparse/CAMD/Include/camd_internal.h
amici/ThirdParty/SuiteSparse/CAMD/MATLAB/camd_mex.c
amici/ThirdParty/SuiteSparse/CAMD/Source/camd_1.c
amici/ThirdParty/SuiteSparse/CAMD/Source/camd_2.c
amici/ThirdParty/SuiteSparse/CAMD/Source/camd_aat.c
amici/ThirdParty/SuiteSparse/CAMD/Source/camd_control.c
amici/ThirdParty/SuiteSparse/CAMD/Source/camd_defaults.c
amici/ThirdParty/SuiteSparse/CAMD/Source/camd_dump.c
amici/ThirdParty/SuiteSparse/CAMD/Source/camd_global.c
amici/ThirdParty/SuiteSparse/CAMD/Source/camd_info.c
amici/ThirdParty/SuiteSparse/CAMD/Source/camd_order.c
amici/ThirdParty/SuiteSparse/CAMD/Source/camd_postorder.c
amici/ThirdParty/SuiteSparse/CAMD/Source/camd_preprocess.c
amici/ThirdParty/SuiteSparse/CAMD/Source/camd_valid.c
amici/ThirdParty/SuiteSparse/COLAMD/Demo/colamd_example.c
amici/ThirdParty/SuiteSparse/COLAMD/Demo/colamd_l_example.c
amici/ThirdParty/SuiteSparse/COLAMD/Include/colamd.h
amici/ThirdParty/SuiteSparse/COLAMD/MATLAB/colamdmex.c
amici/ThirdParty/SuiteSparse/COLAMD/MATLAB/colamdtestmex.c
amici/ThirdParty/SuiteSparse/COLAMD/MATLAB/symamdmex.c
amici/ThirdParty/SuiteSparse/COLAMD/MATLAB/symamdtestmex.c
amici/ThirdParty/SuiteSparse/COLAMD/Source/colamd.c
amici/ThirdParty/SuiteSparse/KLU/Demo/klu_simple.c
amici/ThirdParty/SuiteSparse/KLU/Demo/kludemo.c
amici/ThirdParty/SuiteSparse/KLU/Demo/kluldemo.c
amici/ThirdParty/SuiteSparse/KLU/Include/klu.h
amici/ThirdParty/SuiteSparse/KLU/Include/klu_internal.h
amici/ThirdParty/SuiteSparse/KLU/Include/klu_version.h
amici/ThirdParty/SuiteSparse/KLU/MATLAB/klu_mex.c
amici/ThirdParty/SuiteSparse/KLU/Source/klu.c
amici/ThirdParty/SuiteSparse/KLU/Source/klu_analyze.c
amici/ThirdParty/SuiteSparse/KLU/Source/klu_analyze_given.c
amici/ThirdParty/SuiteSparse/KLU/Source/klu_defaults.c
amici/ThirdParty/SuiteSparse/KLU/Source/klu_diagnostics.c
amici/ThirdParty/SuiteSparse/KLU/Source/klu_dump.c
amici/ThirdParty/SuiteSparse/KLU/Source/klu_extract.c
amici/ThirdParty/SuiteSparse/KLU/Source/klu_factor.c
amici/ThirdParty/SuiteSparse/KLU/Source/klu_free_numeric.c
amici/ThirdParty/SuiteSparse/KLU/Source/klu_free_symbolic.c
amici/ThirdParty/SuiteSparse/KLU/Source/klu_kernel.c
amici/ThirdParty/SuiteSparse/KLU/Source/klu_memory.c
amici/ThirdParty/SuiteSparse/KLU/Source/klu_refactor.c
amici/ThirdParty/SuiteSparse/KLU/Source/klu_scale.c
amici/ThirdParty/SuiteSparse/KLU/Source/klu_solve.c
amici/ThirdParty/SuiteSparse/KLU/Source/klu_sort.c
amici/ThirdParty/SuiteSparse/KLU/Source/klu_tsolve.c
amici/ThirdParty/SuiteSparse/KLU/Tcov/klutest.c
amici/ThirdParty/SuiteSparse/KLU/User/klu_cholmod.c
amici/ThirdParty/SuiteSparse/KLU/User/klu_cholmod.h
amici/ThirdParty/SuiteSparse/KLU/User/klu_l_cholmod.c
amici/ThirdParty/SuiteSparse/SuiteSparse_config/SuiteSparse_config.c
amici/ThirdParty/SuiteSparse/SuiteSparse_config/SuiteSparse_config.h
amici/ThirdParty/SuiteSparse/SuiteSparse_config/xerbla/xerbla.c
amici/ThirdParty/SuiteSparse/SuiteSparse_config/xerbla/xerbla.h
amici/ThirdParty/SuiteSparse/include/SuiteSparse_config.h
amici/ThirdParty/SuiteSparse/include/amd.h
amici/ThirdParty/SuiteSparse/include/btf.h
amici/ThirdParty/SuiteSparse/include/camd.h
amici/ThirdParty/SuiteSparse/include/colamd.h
amici/ThirdParty/SuiteSparse/include/klu.h
amici/ThirdParty/sundials/LICENSE
amici/ThirdParty/sundials/build/CMakeFiles/feature_tests.c
amici/ThirdParty/sundials/build/CMakeFiles/3.10.2/CompilerIdC/CMakeCCompilerId.c
amici/ThirdParty/sundials/build/CMakeFiles/3.9.1/CompilerIdC/CMakeCCompilerId.c
amici/ThirdParty/sundials/build/KLUTest/ltest.c
amici/ThirdParty/sundials/build/include/cvodes/cvodes.h
amici/ThirdParty/sundials/build/include/cvodes/cvodes_band.h
amici/ThirdParty/sundials/build/include/cvodes/cvodes_bandpre.h
amici/ThirdParty/sundials/build/include/cvodes/cvodes_bbdpre.h
amici/ThirdParty/sundials/build/include/cvodes/cvodes_dense.h
amici/ThirdParty/sundials/build/include/cvodes/cvodes_diag.h
amici/ThirdParty/sundials/build/include/cvodes/cvodes_direct.h
amici/ThirdParty/sundials/build/include/cvodes/cvodes_impl.h
amici/ThirdParty/sundials/build/include/cvodes/cvodes_klu.h
amici/ThirdParty/sundials/build/include/cvodes/cvodes_sparse.h
amici/ThirdParty/sundials/build/include/cvodes/cvodes_spbcgs.h
amici/ThirdParty/sundials/build/include/cvodes/cvodes_spgmr.h
amici/ThirdParty/sundials/build/include/cvodes/cvodes_spils.h
amici/ThirdParty/sundials/build/include/cvodes/cvodes_sptfqmr.h
amici/ThirdParty/sundials/build/include/idas/idas.h
amici/ThirdParty/sundials/build/include/idas/idas_band.h
amici/ThirdParty/sundials/build/include/idas/idas_bbdpre.h
amici/ThirdParty/sundials/build/include/idas/idas_dense.h
amici/ThirdParty/sundials/build/include/idas/idas_direct.h
amici/ThirdParty/sundials/build/include/idas/idas_impl.h
amici/ThirdParty/sundials/build/include/idas/idas_klu.h
amici/ThirdParty/sundials/build/include/idas/idas_sparse.h
amici/ThirdParty/sundials/build/include/idas/idas_spbcgs.h
amici/ThirdParty/sundials/build/include/idas/idas_spgmr.h
amici/ThirdParty/sundials/build/include/idas/idas_spils.h
amici/ThirdParty/sundials/build/include/idas/idas_sptfqmr.h
amici/ThirdParty/sundials/build/include/nvector/nvector_serial.h
amici/ThirdParty/sundials/build/include/sundials/sundials_band.h
amici/ThirdParty/sundials/build/include/sundials/sundials_config.h
amici/ThirdParty/sundials/build/include/sundials/sundials_dense.h
amici/ThirdParty/sundials/build/include/sundials/sundials_direct.h
amici/ThirdParty/sundials/build/include/sundials/sundials_fnvector.h
amici/ThirdParty/sundials/build/include/sundials/sundials_iterative.h
amici/ThirdParty/sundials/build/include/sundials/sundials_math.h
amici/ThirdParty/sundials/build/include/sundials/sundials_nvector.h
amici/ThirdParty/sundials/build/include/sundials/sundials_pcg.h
amici/ThirdParty/sundials/build/include/sundials/sundials_sparse.h
amici/ThirdParty/sundials/build/include/sundials/sundials_spbcgs.h
amici/ThirdParty/sundials/build/include/sundials/sundials_spfgmr.h
amici/ThirdParty/sundials/build/include/sundials/sundials_spgmr.h
amici/ThirdParty/sundials/build/include/sundials/sundials_sptfqmr.h
amici/ThirdParty/sundials/build/include/sundials/sundials_types.h
amici/ThirdParty/sundials/include/arkode/arkode.h
amici/ThirdParty/sundials/include/arkode/arkode_band.h
amici/ThirdParty/sundials/include/arkode/arkode_bandpre.h
amici/ThirdParty/sundials/include/arkode/arkode_bbdpre.h
amici/ThirdParty/sundials/include/arkode/arkode_dense.h
amici/ThirdParty/sundials/include/arkode/arkode_direct.h
amici/ThirdParty/sundials/include/arkode/arkode_klu.h
amici/ThirdParty/sundials/include/arkode/arkode_lapack.h
amici/ThirdParty/sundials/include/arkode/arkode_pcg.h
amici/ThirdParty/sundials/include/arkode/arkode_sparse.h
amici/ThirdParty/sundials/include/arkode/arkode_spbcgs.h
amici/ThirdParty/sundials/include/arkode/arkode_spfgmr.h
amici/ThirdParty/sundials/include/arkode/arkode_spgmr.h
amici/ThirdParty/sundials/include/arkode/arkode_spils.h
amici/ThirdParty/sundials/include/arkode/arkode_sptfqmr.h
amici/ThirdParty/sundials/include/arkode/arkode_superlumt.h
amici/ThirdParty/sundials/include/cvode/cvode.h
amici/ThirdParty/sundials/include/cvode/cvode_band.h
amici/ThirdParty/sundials/include/cvode/cvode_bandpre.h
amici/ThirdParty/sundials/include/cvode/cvode_bbdpre.h
amici/ThirdParty/sundials/include/cvode/cvode_dense.h
amici/ThirdParty/sundials/include/cvode/cvode_diag.h
amici/ThirdParty/sundials/include/cvode/cvode_direct.h
amici/ThirdParty/sundials/include/cvode/cvode_klu.h
amici/ThirdParty/sundials/include/cvode/cvode_lapack.h
amici/ThirdParty/sundials/include/cvode/cvode_sparse.h
amici/ThirdParty/sundials/include/cvode/cvode_spbcgs.h
amici/ThirdParty/sundials/include/cvode/cvode_spgmr.h
amici/ThirdParty/sundials/include/cvode/cvode_spils.h
amici/ThirdParty/sundials/include/cvode/cvode_sptfqmr.h
amici/ThirdParty/sundials/include/cvode/cvode_superlumt.h
amici/ThirdParty/sundials/include/cvodes/cvodes.h
amici/ThirdParty/sundials/include/cvodes/cvodes_band.h
amici/ThirdParty/sundials/include/cvodes/cvodes_bandpre.h
amici/ThirdParty/sundials/include/cvodes/cvodes_bbdpre.h
amici/ThirdParty/sundials/include/cvodes/cvodes_dense.h
amici/ThirdParty/sundials/include/cvodes/cvodes_diag.h
amici/ThirdParty/sundials/include/cvodes/cvodes_direct.h
amici/ThirdParty/sundials/include/cvodes/cvodes_klu.h
amici/ThirdParty/sundials/include/cvodes/cvodes_lapack.h
amici/ThirdParty/sundials/include/cvodes/cvodes_sparse.h
amici/ThirdParty/sundials/include/cvodes/cvodes_spbcgs.h
amici/ThirdParty/sundials/include/cvodes/cvodes_spgmr.h
amici/ThirdParty/sundials/include/cvodes/cvodes_spils.h
amici/ThirdParty/sundials/include/cvodes/cvodes_sptfqmr.h
amici/ThirdParty/sundials/include/cvodes/cvodes_superlumt.h
amici/ThirdParty/sundials/include/ida/ida.h
amici/ThirdParty/sundials/include/ida/ida_band.h
amici/ThirdParty/sundials/include/ida/ida_bbdpre.h
amici/ThirdParty/sundials/include/ida/ida_dense.h
amici/ThirdParty/sundials/include/ida/ida_direct.h
amici/ThirdParty/sundials/include/ida/ida_klu.h
amici/ThirdParty/sundials/include/ida/ida_lapack.h
amici/ThirdParty/sundials/include/ida/ida_sparse.h
amici/ThirdParty/sundials/include/ida/ida_spbcgs.h
amici/ThirdParty/sundials/include/ida/ida_spgmr.h
amici/ThirdParty/sundials/include/ida/ida_spils.h
amici/ThirdParty/sundials/include/ida/ida_sptfqmr.h
amici/ThirdParty/sundials/include/ida/ida_superlumt.h
amici/ThirdParty/sundials/include/idas/idas.h
amici/ThirdParty/sundials/include/idas/idas_band.h
amici/ThirdParty/sundials/include/idas/idas_bbdpre.h
amici/ThirdParty/sundials/include/idas/idas_dense.h
amici/ThirdParty/sundials/include/idas/idas_direct.h
amici/ThirdParty/sundials/include/idas/idas_klu.h
amici/ThirdParty/sundials/include/idas/idas_lapack.h
amici/ThirdParty/sundials/include/idas/idas_sparse.h
amici/ThirdParty/sundials/include/idas/idas_spbcgs.h
amici/ThirdParty/sundials/include/idas/idas_spgmr.h
amici/ThirdParty/sundials/include/idas/idas_spils.h
amici/ThirdParty/sundials/include/idas/idas_sptfqmr.h
amici/ThirdParty/sundials/include/idas/idas_superlumt.h
amici/ThirdParty/sundials/include/kinsol/kinsol.h
amici/ThirdParty/sundials/include/kinsol/kinsol_band.h
amici/ThirdParty/sundials/include/kinsol/kinsol_bbdpre.h
amici/ThirdParty/sundials/include/kinsol/kinsol_dense.h
amici/ThirdParty/sundials/include/kinsol/kinsol_direct.h
amici/ThirdParty/sundials/include/kinsol/kinsol_klu.h
amici/ThirdParty/sundials/include/kinsol/kinsol_lapack.h
amici/ThirdParty/sundials/include/kinsol/kinsol_sparse.h
amici/ThirdParty/sundials/include/kinsol/kinsol_spbcgs.h
amici/ThirdParty/sundials/include/kinsol/kinsol_spfgmr.h
amici/ThirdParty/sundials/include/kinsol/kinsol_spgmr.h
amici/ThirdParty/sundials/include/kinsol/kinsol_spils.h
amici/ThirdParty/sundials/include/kinsol/kinsol_sptfqmr.h
amici/ThirdParty/sundials/include/kinsol/kinsol_superlumt.h
amici/ThirdParty/sundials/include/nvector/nvector_openmp.h
amici/ThirdParty/sundials/include/nvector/nvector_parallel.h
amici/ThirdParty/sundials/include/nvector/nvector_parhyp.h
amici/ThirdParty/sundials/include/nvector/nvector_petsc.h
amici/ThirdParty/sundials/include/nvector/nvector_pthreads.h
amici/ThirdParty/sundials/include/nvector/nvector_serial.h
amici/ThirdParty/sundials/include/sundials/sundials_band.h
amici/ThirdParty/sundials/include/sundials/sundials_config.h
amici/ThirdParty/sundials/include/sundials/sundials_dense.h
amici/ThirdParty/sundials/include/sundials/sundials_direct.h
amici/ThirdParty/sundials/include/sundials/sundials_fnvector.h
amici/ThirdParty/sundials/include/sundials/sundials_iterative.h
amici/ThirdParty/sundials/include/sundials/sundials_klu_impl.h
amici/ThirdParty/sundials/include/sundials/sundials_lapack.h
amici/ThirdParty/sundials/include/sundials/sundials_math.h
amici/ThirdParty/sundials/include/sundials/sundials_nvector.h
amici/ThirdParty/sundials/include/sundials/sundials_pcg.h
amici/ThirdParty/sundials/include/sundials/sundials_sparse.h
amici/ThirdParty/sundials/include/sundials/sundials_spbcgs.h
amici/ThirdParty/sundials/include/sundials/sundials_spfgmr.h
amici/ThirdParty/sundials/include/sundials/sundials_spgmr.h
amici/ThirdParty/sundials/include/sundials/sundials_sptfqmr.h
amici/ThirdParty/sundials/include/sundials/sundials_superlumt_impl.h
amici/ThirdParty/sundials/include/sundials/sundials_types.h
amici/ThirdParty/sundials/src/arkode/LICENSE
amici/ThirdParty/sundials/src/arkode/arkode.c
amici/ThirdParty/sundials/src/arkode/arkode_band.c
amici/ThirdParty/sundials/src/arkode/arkode_bandpre.c
amici/ThirdParty/sundials/src/arkode/arkode_bandpre_impl.h
amici/ThirdParty/sundials/src/arkode/arkode_bbdpre.c
amici/ThirdParty/sundials/src/arkode/arkode_bbdpre_impl.h
amici/ThirdParty/sundials/src/arkode/arkode_butcher.c
amici/ThirdParty/sundials/src/arkode/arkode_dense.c
amici/ThirdParty/sundials/src/arkode/arkode_direct.c
amici/ThirdParty/sundials/src/arkode/arkode_direct_impl.h
amici/ThirdParty/sundials/src/arkode/arkode_impl.h
amici/ThirdParty/sundials/src/arkode/arkode_io.c
amici/ThirdParty/sundials/src/arkode/arkode_klu.c
amici/ThirdParty/sundials/src/arkode/arkode_lapack.c
amici/ThirdParty/sundials/src/arkode/arkode_pcg.c
amici/ThirdParty/sundials/src/arkode/arkode_sparse.c
amici/ThirdParty/sundials/src/arkode/arkode_sparse_impl.h
amici/ThirdParty/sundials/src/arkode/arkode_spbcgs.c
amici/ThirdParty/sundials/src/arkode/arkode_spfgmr.c
amici/ThirdParty/sundials/src/arkode/arkode_spgmr.c
amici/ThirdParty/sundials/src/arkode/arkode_spils.c
amici/ThirdParty/sundials/src/arkode/arkode_spils_impl.h
amici/ThirdParty/sundials/src/arkode/arkode_sptfqmr.c
amici/ThirdParty/sundials/src/arkode/arkode_superlumt.c
amici/ThirdParty/sundials/src/arkode/fcmix/farkadapt.c
amici/ThirdParty/sundials/src/arkode/fcmix/farkband.c
amici/ThirdParty/sundials/src/arkode/fcmix/farkbandmass.c
amici/ThirdParty/sundials/src/arkode/fcmix/farkbbd.c
amici/ThirdParty/sundials/src/arkode/fcmix/farkbbd.h
amici/ThirdParty/sundials/src/arkode/fcmix/farkbp.c
amici/ThirdParty/sundials/src/arkode/fcmix/farkbp.h
amici/ThirdParty/sundials/src/arkode/fcmix/farkdense.c
amici/ThirdParty/sundials/src/arkode/fcmix/farkdensemass.c
amici/ThirdParty/sundials/src/arkode/fcmix/farkewt.c
amici/ThirdParty/sundials/src/arkode/fcmix/farkexpstab.c
amici/ThirdParty/sundials/src/arkode/fcmix/farkjtimes.c
amici/ThirdParty/sundials/src/arkode/fcmix/farkklu.c
amici/ThirdParty/sundials/src/arkode/fcmix/farklapack.c
amici/ThirdParty/sundials/src/arkode/fcmix/farklapband.c
amici/ThirdParty/sundials/src/arkode/fcmix/farklapbandmass.c
amici/ThirdParty/sundials/src/arkode/fcmix/farklapdense.c
amici/ThirdParty/sundials/src/arkode/fcmix/farklapdensemass.c
amici/ThirdParty/sundials/src/arkode/fcmix/farkmasspreco.c
amici/ThirdParty/sundials/src/arkode/fcmix/farkmtimes.c
amici/ThirdParty/sundials/src/arkode/fcmix/farkode.c
amici/ThirdParty/sundials/src/arkode/fcmix/farkode.h
amici/ThirdParty/sundials/src/arkode/fcmix/farkpreco.c
amici/ThirdParty/sundials/src/arkode/fcmix/farkroot.c
amici/ThirdParty/sundials/src/arkode/fcmix/farkroot.h
amici/ThirdParty/sundials/src/arkode/fcmix/farksparse.c
amici/ThirdParty/sundials/src/arkode/fcmix/farksparsemass.c
amici/ThirdParty/sundials/src/arkode/fcmix/farksuperlumt.c
amici/ThirdParty/sundials/src/cvode/LICENSE
amici/ThirdParty/sundials/src/cvode/cvode.c
amici/ThirdParty/sundials/src/cvode/cvode_band.c
amici/ThirdParty/sundials/src/cvode/cvode_bandpre.c
amici/ThirdParty/sundials/src/cvode/cvode_bandpre_impl.h
amici/ThirdParty/sundials/src/cvode/cvode_bbdpre.c
amici/ThirdParty/sundials/src/cvode/cvode_bbdpre_impl.h
amici/ThirdParty/sundials/src/cvode/cvode_dense.c
amici/ThirdParty/sundials/src/cvode/cvode_diag.c
amici/ThirdParty/sundials/src/cvode/cvode_diag_impl.h
amici/ThirdParty/sundials/src/cvode/cvode_direct.c
amici/ThirdParty/sundials/src/cvode/cvode_direct_impl.h
amici/ThirdParty/sundials/src/cvode/cvode_impl.h
amici/ThirdParty/sundials/src/cvode/cvode_io.c
amici/ThirdParty/sundials/src/cvode/cvode_klu.c
amici/ThirdParty/sundials/src/cvode/cvode_lapack.c
amici/ThirdParty/sundials/src/cvode/cvode_sparse.c
amici/ThirdParty/sundials/src/cvode/cvode_sparse_impl.h
amici/ThirdParty/sundials/src/cvode/cvode_spbcgs.c
amici/ThirdParty/sundials/src/cvode/cvode_spgmr.c
amici/ThirdParty/sundials/src/cvode/cvode_spils.c
amici/ThirdParty/sundials/src/cvode/cvode_spils_impl.h
amici/ThirdParty/sundials/src/cvode/cvode_sptfqmr.c
amici/ThirdParty/sundials/src/cvode/cvode_superlumt.c
amici/ThirdParty/sundials/src/cvode/fcmix/fcvband.c
amici/ThirdParty/sundials/src/cvode/fcmix/fcvbbd.c
amici/ThirdParty/sundials/src/cvode/fcmix/fcvbbd.h
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amici/ThirdParty/sundials/src/cvode/fcmix/fcvbp.h
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amici/ThirdParty/sundials/src/cvode/fcmix/fcvewt.c
amici/ThirdParty/sundials/src/cvode/fcmix/fcvjtimes.c
amici/ThirdParty/sundials/src/cvode/fcmix/fcvklu.c
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amici/ThirdParty/sundials/src/cvode/fcmix/fcvlapband.c
amici/ThirdParty/sundials/src/cvode/fcmix/fcvlapdense.c
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amici/ThirdParty/sundials/src/cvode/fcmix/fcvode.h
amici/ThirdParty/sundials/src/cvode/fcmix/fcvpreco.c
amici/ThirdParty/sundials/src/cvode/fcmix/fcvroot.c
amici/ThirdParty/sundials/src/cvode/fcmix/fcvroot.h
amici/ThirdParty/sundials/src/cvode/fcmix/fcvsparse.c
amici/ThirdParty/sundials/src/cvode/fcmix/fcvsuperlumt.c
amici/ThirdParty/sundials/src/cvodes/LICENSE
amici/ThirdParty/sundials/src/cvodes/cvodea.c
amici/ThirdParty/sundials/src/cvodes/cvodea_io.c
amici/ThirdParty/sundials/src/cvodes/cvodes.c
amici/ThirdParty/sundials/src/cvodes/cvodes_band.c
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amici/ThirdParty/sundials/src/cvodes/cvodes_bandpre_impl.h
amici/ThirdParty/sundials/src/cvodes/cvodes_bbdpre.c
amici/ThirdParty/sundials/src/cvodes/cvodes_bbdpre_impl.h
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amici/ThirdParty/sundials/src/cvodes/cvodes_diag_impl.h
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amici/ThirdParty/sundials/src/cvodes/cvodes_impl.h
amici/ThirdParty/sundials/src/cvodes/cvodes_io.c
amici/ThirdParty/sundials/src/cvodes/cvodes_klu.c
amici/ThirdParty/sundials/src/cvodes/cvodes_lapack.c
amici/ThirdParty/sundials/src/cvodes/cvodes_sparse.c
amici/ThirdParty/sundials/src/cvodes/cvodes_sparse_impl.h
amici/ThirdParty/sundials/src/cvodes/cvodes_spbcgs.c
amici/ThirdParty/sundials/src/cvodes/cvodes_spgmr.c
amici/ThirdParty/sundials/src/cvodes/cvodes_spils.c
amici/ThirdParty/sundials/src/cvodes/cvodes_spils_impl.h
amici/ThirdParty/sundials/src/cvodes/cvodes_sptfqmr.c
amici/ThirdParty/sundials/src/cvodes/cvodes_superlumt.c
amici/ThirdParty/sundials/src/ida/LICENSE
amici/ThirdParty/sundials/src/ida/ida.c
amici/ThirdParty/sundials/src/ida/ida_band.c
amici/ThirdParty/sundials/src/ida/ida_bbdpre.c
amici/ThirdParty/sundials/src/ida/ida_bbdpre_impl.h
amici/ThirdParty/sundials/src/ida/ida_dense.c
amici/ThirdParty/sundials/src/ida/ida_direct.c
amici/ThirdParty/sundials/src/ida/ida_direct_impl.h
amici/ThirdParty/sundials/src/ida/ida_ic.c
amici/ThirdParty/sundials/src/ida/ida_impl.h
amici/ThirdParty/sundials/src/ida/ida_io.c
amici/ThirdParty/sundials/src/ida/ida_klu.c
amici/ThirdParty/sundials/src/ida/ida_lapack.c
amici/ThirdParty/sundials/src/ida/ida_sparse.c
amici/ThirdParty/sundials/src/ida/ida_sparse_impl.h
amici/ThirdParty/sundials/src/ida/ida_spbcgs.c
amici/ThirdParty/sundials/src/ida/ida_spgmr.c
amici/ThirdParty/sundials/src/ida/ida_spils.c
amici/ThirdParty/sundials/src/ida/ida_spils_impl.h
amici/ThirdParty/sundials/src/ida/ida_sptfqmr.c
amici/ThirdParty/sundials/src/ida/ida_superlumt.c
amici/ThirdParty/sundials/src/ida/fcmix/fida.c
amici/ThirdParty/sundials/src/ida/fcmix/fida.h
amici/ThirdParty/sundials/src/ida/fcmix/fidaband.c
amici/ThirdParty/sundials/src/ida/fcmix/fidabbd.c
amici/ThirdParty/sundials/src/ida/fcmix/fidabbd.h
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amici/ThirdParty/sundials/src/ida/fcmix/fidaewt.c
amici/ThirdParty/sundials/src/ida/fcmix/fidajtimes.c
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amici/ThirdParty/sundials/src/ida/fcmix/fidalapband.c
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amici/ThirdParty/sundials/src/ida/fcmix/fidaroot.c
amici/ThirdParty/sundials/src/ida/fcmix/fidaroot.h
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amici/ThirdParty/sundials/src/ida/fcmix/fidasuperlumt.c
amici/ThirdParty/sundials/src/idas/LICENSE
amici/ThirdParty/sundials/src/idas/idaa.c
amici/ThirdParty/sundials/src/idas/idaa_io.c
amici/ThirdParty/sundials/src/idas/idas.c
amici/ThirdParty/sundials/src/idas/idas_band.c
amici/ThirdParty/sundials/src/idas/idas_bbdpre.c
amici/ThirdParty/sundials/src/idas/idas_bbdpre_impl.h
amici/ThirdParty/sundials/src/idas/idas_dense.c
amici/ThirdParty/sundials/src/idas/idas_direct.c
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amici/ThirdParty/sundials/src/idas/idas_ic.c
amici/ThirdParty/sundials/src/idas/idas_impl.h
amici/ThirdParty/sundials/src/idas/idas_io.c
amici/ThirdParty/sundials/src/idas/idas_klu.c
amici/ThirdParty/sundials/src/idas/idas_lapack.c
amici/ThirdParty/sundials/src/idas/idas_sparse.c
amici/ThirdParty/sundials/src/idas/idas_sparse_impl.h
amici/ThirdParty/sundials/src/idas/idas_spbcgs.c
amici/ThirdParty/sundials/src/idas/idas_spgmr.c
amici/ThirdParty/sundials/src/idas/idas_spils.c
amici/ThirdParty/sundials/src/idas/idas_spils_impl.h
amici/ThirdParty/sundials/src/idas/idas_sptfqmr.c
amici/ThirdParty/sundials/src/idas/idas_superlumt.c
amici/ThirdParty/sundials/src/kinsol/LICENSE
amici/ThirdParty/sundials/src/kinsol/kinsol.c
amici/ThirdParty/sundials/src/kinsol/kinsol_band.c
amici/ThirdParty/sundials/src/kinsol/kinsol_bbdpre.c
amici/ThirdParty/sundials/src/kinsol/kinsol_bbdpre_impl.h
amici/ThirdParty/sundials/src/kinsol/kinsol_dense.c
amici/ThirdParty/sundials/src/kinsol/kinsol_direct.c
amici/ThirdParty/sundials/src/kinsol/kinsol_direct_impl.h
amici/ThirdParty/sundials/src/kinsol/kinsol_impl.h
amici/ThirdParty/sundials/src/kinsol/kinsol_io.c
amici/ThirdParty/sundials/src/kinsol/kinsol_klu.c
amici/ThirdParty/sundials/src/kinsol/kinsol_lapack.c
amici/ThirdParty/sundials/src/kinsol/kinsol_sparse.c
amici/ThirdParty/sundials/src/kinsol/kinsol_sparse_impl.h
amici/ThirdParty/sundials/src/kinsol/kinsol_spbcgs.c
amici/ThirdParty/sundials/src/kinsol/kinsol_spfgmr.c
amici/ThirdParty/sundials/src/kinsol/kinsol_spgmr.c
amici/ThirdParty/sundials/src/kinsol/kinsol_spils.c
amici/ThirdParty/sundials/src/kinsol/kinsol_spils_impl.h
amici/ThirdParty/sundials/src/kinsol/kinsol_sptfqmr.c
amici/ThirdParty/sundials/src/kinsol/kinsol_superlumt.c
amici/ThirdParty/sundials/src/kinsol/fcmix/fkinband.c
amici/ThirdParty/sundials/src/kinsol/fcmix/fkinbbd.c
amici/ThirdParty/sundials/src/kinsol/fcmix/fkinbbd.h
amici/ThirdParty/sundials/src/kinsol/fcmix/fkindense.c
amici/ThirdParty/sundials/src/kinsol/fcmix/fkinjtimes.c
amici/ThirdParty/sundials/src/kinsol/fcmix/fkinklu.c
amici/ThirdParty/sundials/src/kinsol/fcmix/fkinlapack.c
amici/ThirdParty/sundials/src/kinsol/fcmix/fkinlapband.c
amici/ThirdParty/sundials/src/kinsol/fcmix/fkinlapdense.c
amici/ThirdParty/sundials/src/kinsol/fcmix/fkinpreco.c
amici/ThirdParty/sundials/src/kinsol/fcmix/fkinsol.c
amici/ThirdParty/sundials/src/kinsol/fcmix/fkinsol.h
amici/ThirdParty/sundials/src/kinsol/fcmix/fkinsparse.c
amici/ThirdParty/sundials/src/kinsol/fcmix/fkinsuperlumt.c
amici/ThirdParty/sundials/src/nvec_openmp/fnvector_openmp.c
amici/ThirdParty/sundials/src/nvec_openmp/fnvector_openmp.h
amici/ThirdParty/sundials/src/nvec_openmp/nvector_openmp.c
amici/ThirdParty/sundials/src/nvec_par/fnvector_parallel.c
amici/ThirdParty/sundials/src/nvec_par/fnvector_parallel.h
amici/ThirdParty/sundials/src/nvec_par/nvector_parallel.c
amici/ThirdParty/sundials/src/nvec_parhyp/nvector_parhyp.c
amici/ThirdParty/sundials/src/nvec_petsc/nvector_petsc.c
amici/ThirdParty/sundials/src/nvec_pthreads/fnvector_pthreads.c
amici/ThirdParty/sundials/src/nvec_pthreads/fnvector_pthreads.h
amici/ThirdParty/sundials/src/nvec_pthreads/nvector_pthreads.c
amici/ThirdParty/sundials/src/nvec_ser/fnvector_serial.c
amici/ThirdParty/sundials/src/nvec_ser/fnvector_serial.h
amici/ThirdParty/sundials/src/nvec_ser/nvector_serial.c
amici/ThirdParty/sundials/src/sundials/LICENSE
amici/ThirdParty/sundials/src/sundials/sundials_band.c
amici/ThirdParty/sundials/src/sundials/sundials_dense.c
amici/ThirdParty/sundials/src/sundials/sundials_direct.c
amici/ThirdParty/sundials/src/sundials/sundials_iterative.c
amici/ThirdParty/sundials/src/sundials/sundials_math.c
amici/ThirdParty/sundials/src/sundials/sundials_nvector.c
amici/ThirdParty/sundials/src/sundials/sundials_pcg.c
amici/ThirdParty/sundials/src/sundials/sundials_sparse.c
amici/ThirdParty/sundials/src/sundials/sundials_spbcgs.c
amici/ThirdParty/sundials/src/sundials/sundials_spfgmr.c
amici/ThirdParty/sundials/src/sundials/sundials_spgmr.c
amici/ThirdParty/sundials/src/sundials/sundials_sptfqmr.c
amici/include/amici/amici.h
amici/include/amici/backwardproblem.h
amici/include/amici/defines.h
amici/include/amici/edata.h
amici/include/amici/exception.h
amici/include/amici/forwardproblem.h
amici/include/amici/hdf5.h
amici/include/amici/interface_matlab.h
amici/include/amici/misc.h
amici/include/amici/model.h
amici/include/amici/model_dae.h
amici/include/amici/model_ode.h
amici/include/amici/newton_solver.h
amici/include/amici/rdata.h
amici/include/amici/returndata_matlab.h
amici/include/amici/serialization.h
amici/include/amici/solver.h
amici/include/amici/solver_cvodes.h
amici/include/amici/solver_idas.h
amici/include/amici/spline.h
amici/include/amici/steadystateproblem.h
amici/include/amici/symbolic_functions.h
amici/include/amici/vector.h
amici/include/amici/version.in.h
amici/src/CMakeLists.template.txt
amici/src/amici.cpp
amici/src/backwardproblem.cpp
amici/src/cblas.cpp
amici/src/edata.cpp
amici/src/forwardproblem.cpp
amici/src/hdf5.cpp
amici/src/main.template.cpp
amici/src/misc.cpp
amici/src/model.cpp
amici/src/model_dae.cpp
amici/src/model_header.ODE_template.h
amici/src/model_ode.cpp
amici/src/newton_solver.cpp
amici/src/rdata.cpp
amici/src/solver.cpp
amici/src/solver_cvodes.cpp
amici/src/solver_idas.cpp
amici/src/spline.cpp
amici/src/steadystateproblem.cpp
amici/src/symbolic_functions.cpp
amici/src/wrapfunctions.ODE_template.h
amici/src/wrapfunctions.template.cpp
amici/swig/CMakeLists_model.txt
amici/swig/amici.i
amici/swig/edata.i
amici/swig/hdf5.i
amici/swig/model.i
amici/swig/model_dae.i
amici/swig/model_ode.i
amici/swig/modelname.template.i
amici/swig/rdata.i
amici/swig/solver.i
amici/swig/solver_cvodes.i
amici/swig/solver_idas.i
amici/swig/std_unique_ptr.i
tests/__init__.py
tests/amici_test.py