Metadata-Version: 2.1
Name: snphwe
Version: 1.1.0
Summary: fast hardy weinberg test
Home-page: https://github.com/jeremymcrae/snphwe
Author: Jeremy McRae (original code by Jan Wiggington)
Author-email: jmcrae@illumina.com
License: MIT
Description: ### snphwe: An exact test of Hardy-Weinberg Equilibrium
        Reimplementation in Python of an exact SNP test of Hardy-Weinberg Equilibrium, as
        described in Wigginton, JE, Cutler, DJ, and Abecasis, GR (2005) A Note on
        Exact Tests of Hardy-Weinberg Equilibrium. AJHG 76: 887-893.
        
        This package is just a python wrapper around their
        [c implementation](http://csg.sph.umich.edu/abecasis/Exact/snp_hwe.c).
        
        #### Installation
        The simplest way to install snphwe is through pip:
        ```sh
        pip install snphwe
        ```
        
        #### Usage
        Use snphwe within a python environment
        ```python
        from snphwe import snphwe
        
        hom1 = 10
        hets = 500
        hom2 = 5000
        hwe_p = snphwe(hets, hom1, hom2)
        ```
        
Platform: UNKNOWN
Classifier: Development Status :: 5 - Production/Stable
Classifier: Topic :: Scientific/Engineering :: Bio-Informatics
Classifier: License :: OSI Approved :: MIT License
Description-Content-Type: text/markdown
