.gitignore
LICENSE
README.md
pyproject.toml
requirements.txt
setup.py
bin/STRIDE
docs/Makefile
docs/conf.py
docs/index.rst
docs/installation.rst
docs/make.bat
docs/requirements.txt
docs/tutorials.rst
docs/_static/custom.css
docs/_static/img/GEO-seq_E7.5_3cluster_scatter_plot.png
docs/_static/img/GEO-seq_E7.5_deconv_scatterpie_plot.png
docs/_static/img/Human_heart_6.5PCW_integration_plot.png
docs/_static/img/Human_heart_S9_4cluster_scatter_plot.png
docs/_static/img/Human_heart_S9_deconv_scatterpie_plot.png
docs/_static/img/Workflow.png
docs/_static/img/thumbnail/Human_SCC.png
docs/_static/img/thumbnail/Human_heart.png
docs/_static/img/thumbnail/Mouse_embryo.png
docs/_static/img/thumbnail/mouse_cerebellum.png
docs/release_notes/0.0.1.rst
docs/release_notes/index.rst
docs/tutorials/Human_heart.rst
docs/tutorials/Mouse_embryo.rst
src/STRIDE/Clustering.py
src/STRIDE/Deconvolution.py
src/STRIDE/Integration.py
src/STRIDE/ModelEvaluate.py
src/STRIDE/ModelTrain.py
src/STRIDE/Plot.py
src/STRIDE/__init__.py
src/STRIDE/version.py
src/STRIDE/utility/IO.py
src/STRIDE/utility/MarkerFind.py
src/STRIDE/utility/ParameterValidate.py
src/STRIDE/utility/__init__.py
src/stridespatial.egg-info/PKG-INFO
src/stridespatial.egg-info/SOURCES.txt
src/stridespatial.egg-info/dependency_links.txt
src/stridespatial.egg-info/requires.txt
src/stridespatial.egg-info/top_level.txt