.gitignore
.gitlab-ci.yml
.readthedocs.yaml
COPYING
COPYING.LESSER
LICENSE
README.md
pylintrc
setup.py
tox.ini
.github/workflows/tests.yml
docs/images/corelay-logo.png
docs/images/corelay-logo.svg
docs/source/bibliography.bib
docs/source/bibliography.rst
docs/source/conf.py
docs/source/getting-started.rst
docs/source/index.rst
docs/source/_static/favicon.svg
docs/source/_templates/autosummary/module.rst
docs/source/reference/index.rst
example/corelay_basics.py
example/hdf5_structure.py
example/memoize_spectral_pipeline.py
example/virelay_analysis.py
src/corelay/__init__.py
src/corelay/base.py
src/corelay/plugboard.py
src/corelay/tracker.py
src/corelay/utils.py
src/corelay.egg-info/PKG-INFO
src/corelay.egg-info/SOURCES.txt
src/corelay.egg-info/dependency_links.txt
src/corelay.egg-info/requires.txt
src/corelay.egg-info/top_level.txt
src/corelay/io/__init__.py
src/corelay/io/hashing.py
src/corelay/io/storage.py
src/corelay/pipeline/__init__.py
src/corelay/pipeline/base.py
src/corelay/pipeline/spectral.py
src/corelay/processor/__init__.py
src/corelay/processor/affinity.py
src/corelay/processor/base.py
src/corelay/processor/clustering.py
src/corelay/processor/distance.py
src/corelay/processor/embedding.py
src/corelay/processor/flow.py
src/corelay/processor/laplacian.py
src/corelay/processor/preprocessing.py
tests/__init__.py
tests/corelay/__init__.py
tests/corelay/test_base.py
tests/corelay/test_plugboard.py
tests/corelay/test_tracker.py
tests/corelay/test_utils.py
tests/corelay/io/__init__.py
tests/corelay/io/test_storage.py
tests/corelay/pipeline/__init__.py
tests/corelay/pipeline/test_base.py
tests/corelay/pipeline/test_spectral.py
tests/corelay/processor/__init__.py
tests/corelay/processor/test_base.py
tests/corelay/processor/test_clustering.py
tests/corelay/processor/test_embedding.py
tests/corelay/processor/test_flow.py
tests/corelay/processor/test_preprocessing.py