.coveragerc
.travis.yml
AUTHORS.rst
CHANGELOG.rst
CONTRIBUTING.rst
LICENSE
MANIFEST.in
Makefile
README.rst
setup.cfg
setup.py
tox.ini
dataset_creator/__init__.py
dataset_creator/base_dataset.py
dataset_creator/creator.py
dataset_creator/dataset.py
dataset_creator/exceptions.py
dataset_creator/genbank_fasta.py
dataset_creator/mega.py
dataset_creator/phylip.py
dataset_creator/tnt.py
dataset_creator/utils.py
dataset_creator.egg-info/PKG-INFO
dataset_creator.egg-info/SOURCES.txt
dataset_creator.egg-info/dependency_links.txt
dataset_creator.egg-info/entry_points.txt
dataset_creator.egg-info/requires.txt
dataset_creator.egg-info/top_level.txt
docs/Makefile
docs/conf.py
docs/dataset_creator.rst
docs/index.rst
docs/modules.rst
docs/usage.rst
media/logo.svg
requirements/base.txt
requirements/testing.txt
tests/__init__.py
tests/data.py
tests/generate_test_data.py
tests/sample_data.txt
tests/sample_data_numbers.txt
tests/test_creator.py
tests/test_dataset.py
tests/test_datasetblock.py
tests/test_fasta.py
tests/test_genbankfasta.py
tests/test_mega.py
tests/test_nexus.py
tests/test_phylip.py
tests/test_tnt.py
tests/test_utils.py
tests/Fasta/dataset.fas
tests/Fasta/dataset_1st.fas
tests/Fasta/dataset_1st2nd.fas
tests/Fasta/dataset_1st2nd_3rd.fas
tests/Fasta/dataset_1st2nd_3rd_numbers.fas
tests/Fasta/dataset_1st2nd_numbers.fas
tests/Fasta/dataset_1st_numbers.fas
tests/Fasta/dataset_2nd.fas
tests/Fasta/dataset_2nd_numbers.fas
tests/Fasta/dataset_3rd.fas
tests/Fasta/dataset_3rd_numbers.fas
tests/Fasta/dataset_genbankfasta.fas
tests/Fasta/dataset_with_gaps.fas
tests/Mega/dataset.meg
tests/Mega/dataset_aa.meg
tests/Mega/dataset_degenerate.meg
tests/Nexus/dataset.nex
tests/Nexus/dataset_1st2nd_codons.nex
tests/Nexus/dataset_1st2nd_codons_numbers.nex
tests/Nexus/dataset_1st2nd_codons_partitioned_as_1st2nd_3rd.nex
tests/Nexus/dataset_1st2nd_codons_partitioned_as_1st2nd_3rd_numbers.nex
tests/Nexus/dataset_1st2nd_codons_partitioned_as_each.nex
tests/Nexus/dataset_1st2nd_codons_partitioned_as_each_numbers.nex
tests/Nexus/dataset_1st_codon.nex
tests/Nexus/dataset_1st_codon_numbers.nex
tests/Nexus/dataset_3rd_codon.nex
tests/Nexus/dataset_3rd_codon_numbers.nex
tests/Nexus/dataset_aa.nex
tests/Nexus/dataset_degenerated.nex
tests/Nexus/dataset_missing_argkin.nex
tests/Nexus/dataset_partitioned_as_1st2nd_3rd.nex
tests/Nexus/dataset_partitioned_as_each.nex
tests/Phylip/charset_block_file.txt
tests/Phylip/dataset.phy
tests/Tnt/dataset.tnt
tests/Tnt/dataset_aa_with_outgroup.tnt
tests/Tnt/dataset_degenerate.tnt
tests/Tnt/dataset_outgroup.tnt