MANIFEST.in
README.rst
requirements.txt
setup.cfg
setup.py
sequana_pipelines/variant_calling/__init__.py
sequana_pipelines/variant_calling/config.yaml
sequana_pipelines/variant_calling/dag.png
sequana_pipelines/variant_calling/logo.png
sequana_pipelines/variant_calling/main.py
sequana_pipelines/variant_calling/multiqc_config.yaml
sequana_pipelines/variant_calling/requirements.txt
sequana_pipelines/variant_calling/variant_calling.rules
sequana_pipelines/variant_calling/data/JB409847.fasta
sequana_pipelines/variant_calling/data/JB409847.gbk
sequana_pipelines/variant_calling/data/__init__.py
sequana_pipelines/variant_calling/data/data_R1_.fastq.gz
sequana_pipelines/variant_calling/data/data_R2_.fastq.gz
sequana_pipelines/variant_calling/test/variant_calling.rules
sequana_pipelines/variant_calling/test/.sequana/variant_calling.rules
sequana_pipelines/variant_calling/test/.snakemake/sequana/0461cc45-234c-4816-ab90-a8d2be1a32b7.rules
sequana_pipelines/variant_calling/test/.snakemake/sequana/0638cae9-9d16-4e4c-bf24-1e5832fc289e.rules
sequana_pipelines/variant_calling/test/.snakemake/sequana/0eac31f0-178b-4a21-8bdf-099a0b5e4283.rules
sequana_pipelines/variant_calling/test/.snakemake/sequana/133c98d7-a2ba-4fbd-9e5e-13f57742c53d.rules
sequana_pipelines/variant_calling/test/.snakemake/sequana/14910493-1ba6-4a38-b17f-0dd081d07f2d.rules
sequana_pipelines/variant_calling/test/.snakemake/sequana/20d34f26-ac61-42a4-b823-f4eb4f3ab2f3.rules
sequana_pipelines/variant_calling/test/.snakemake/sequana/228867f2-fc8f-4183-8590-67b463cd3a0b.rules
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sequana_pipelines/variant_calling/test/.snakemake/sequana/46c683c8-a511-4980-97d5-a410fbcdab0d.rules
sequana_pipelines/variant_calling/test/.snakemake/sequana/51ea2140-d933-4ca4-987b-7c3a0d02ee10.rules
sequana_pipelines/variant_calling/test/.snakemake/sequana/5e70f091-6f6b-40f6-ac20-3b9ed4017732.rules
sequana_pipelines/variant_calling/test/.snakemake/sequana/6a591000-9094-4b6a-9dd5-559be682fc3b.rules
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sequana_pipelines/variant_calling/test/.snakemake/sequana/88c47214-f298-46ca-a698-72cab59630de.rules
sequana_pipelines/variant_calling/test/.snakemake/sequana/925ef314-cd1d-4723-b031-5622e7d79f59.rules
sequana_pipelines/variant_calling/test/.snakemake/sequana/a318e19d-a267-4420-ae32-0d1b240368d5.rules
sequana_pipelines/variant_calling/test/.snakemake/sequana/a5f6dbff-f7ff-4194-940f-e6935239b880.rules
sequana_pipelines/variant_calling/test/.snakemake/sequana/acfc1866-9137-4a57-9b15-9ada1577c776.rules
sequana_pipelines/variant_calling/test/.snakemake/sequana/add35f17-1907-46f3-8c41-0a8c16a4dcd7.rules
sequana_pipelines/variant_calling/test/.snakemake/sequana/afb34212-ce14-4141-9121-b70406b2ec0a.rules
sequana_pipelines/variant_calling/test/.snakemake/sequana/b26849af-47b4-4abe-98fb-bd1ae5c3cefe.rules
sequana_pipelines/variant_calling/test/.snakemake/sequana/c2346e2a-0f6c-400a-b57b-b088f1493238.rules
sequana_pipelines/variant_calling/test/.snakemake/sequana/d2b7d8ac-0a22-4ea7-83c7-57d79f4d2f6e.rules
sequana_pipelines/variant_calling/test/.snakemake/sequana/d2dfd64d-4907-434e-8e29-1d0fb9278781.rules
sequana_pipelines/variant_calling/test/.snakemake/sequana/db6832c6-82cc-4574-ab96-ca93ac0cee40.rules
sequana_pipelines/variant_calling/test/.snakemake/sequana/e211d11a-988a-4785-93b6-4e141c8faea7.rules
sequana_pipelines/variant_calling/test/.snakemake/sequana/f6c32002-3fc4-4ae3-81a6-2ee01c2308e3.rules
sequana_pipelines/variant_calling/test/.snakemake/sequana/f8010eb6-147c-4584-bdc9-14aec3ee540e.rules
sequana_pipelines/variant_calling/test/.snakemake/sequana/fdfd6844-7f8c-4700-9cd2-2b194931ccff.rules
sequana_pipelines/variant_calling/test/report_vc_data/inputs/variant_calling.rules
sequana_pipelines/variant_calling/test/report_vc_data2/inputs/variant_calling.rules
sequana_pipelines/variant_calling/test/rulegraph/.snakemake/sequana/1c0049ad-75d9-4832-99c4-421be3fdaa93.rules
sequana_pipelines/variant_calling/test/rulegraph/.snakemake/sequana/335e5c10-4a02-4199-bd0b-45e2582e152d.rules
sequana_variant_calling.egg-info/PKG-INFO
sequana_variant_calling.egg-info/SOURCES.txt
sequana_variant_calling.egg-info/dependency_links.txt
sequana_variant_calling.egg-info/entry_points.txt
sequana_variant_calling.egg-info/not-zip-safe
sequana_variant_calling.egg-info/requires.txt
sequana_variant_calling.egg-info/top_level.txt
test/test_main.py