.bettercodehub.yml
.editorconfig
.gitattributes
.gitignore
.travis.yml
AUTHORS.rst
CODE_OF_CONDUCT.md
CONTRIBUTING.rst
CONTRIBUTING_IDEAS_SUGGESTIONS.rst
HISTORY.rst
LICENSE
MANIFEST.in
Makefile
README.rst
cmd2pkg
github_deploy_key_raamana_visualqc.enc
requirements.txt
requirements_dev.txt
setup.cfg
setup.py
tox.ini
travis_pypi_setup.py
versioneer.py
.github/ISSUE_TEMPLATE.md
.idea/modules.xml
.idea/inspectionProfiles/Project_Default.xml
.travis/fake_freesurfer_install
docs/.gitignore
docs/.nojekyll
docs/Manual.pdf
docs/VisualQC_TrainingManual_v1p4.pdf
docs/_config.yml
docs/requirements_docs.txt
docs/visualqc_poster_comprehensive.pdf
docs/_static/theme_overrides.css
example_datasets/id_list
example_datasets/sub1
example_datasets/sub10
example_datasets/sub11
example_datasets/sub12
example_datasets/sub13
example_datasets/sub14
example_datasets/sub15
example_datasets/sub16
example_datasets/sub17
example_datasets/sub18
example_datasets/sub19
example_datasets/sub2
example_datasets/sub20
example_datasets/sub21
example_datasets/sub22
example_datasets/sub23
example_datasets/sub24
example_datasets/sub25
example_datasets/sub26
example_datasets/sub27
example_datasets/sub28
example_datasets/sub29
example_datasets/sub3
example_datasets/sub30
example_datasets/sub4
example_datasets/sub5
example_datasets/sub6
example_datasets/sub7
example_datasets/sub8
example_datasets/sub9
example_datasets/id_001/aparc+aseg.mgz
example_datasets/id_001/brainmask.mgz
example_datasets/id_001/orig.mgz
example_datasets/id_001/mri/aparc+aseg.mgz
example_datasets/id_001/mri/brainmask.mgz
example_datasets/id_001/mri/orig.mgz
example_datasets/id_001/stats/aseg.stats
example_datasets/id_001/stats/lh.BA.stats
example_datasets/id_001/stats/lh.aparc.a2009s.stats
example_datasets/id_001/stats/lh.aparc.stats
example_datasets/id_001/stats/lh.entorhinal_exvivo.stats
example_datasets/id_001/stats/rh.BA.stats
example_datasets/id_001/stats/rh.aparc.a2009s.stats
example_datasets/id_001/stats/rh.aparc.stats
example_datasets/id_001/stats/rh.entorhinal_exvivo.stats
example_datasets/id_001/stats/wmparc.stats
scripts/generate_rendered_images_3Dvolume_deface.m
visualqc/__alignment__.py
visualqc/__defacing__.py
visualqc/__diffusion__.py
visualqc/__freesurfer__.py
visualqc/__func_mri__.py
visualqc/__init__.py
visualqc/__t1_mri__.py
visualqc/_version.py
visualqc/alignment.py
visualqc/config.py
visualqc/defacing.py
visualqc/diffusion.py
visualqc/features.py
visualqc/freesurfer.py
visualqc/functional_mri.py
visualqc/image_utils.py
visualqc/interfaces.py
visualqc/outliers.py
visualqc/readers.py
visualqc/t1_mri.py
visualqc/utils.py
visualqc/workflows.py
visualqc.egg-info/PKG-INFO
visualqc.egg-info/SOURCES.txt
visualqc.egg-info/dependency_links.txt
visualqc.egg-info/entry_points.txt
visualqc.egg-info/not-zip-safe
visualqc.egg-info/requires.txt
visualqc.egg-info/top_level.txt
visualqc/resources/atlases/mni_icbm152_nl_VI_nifti/COPYING
visualqc/resources/atlases/mni_icbm152_nl_VI_nifti/README
visualqc/resources/atlases/mni_icbm152_nl_VI_nifti/icbm_avg_152_t1_tal_nlin_symmetric_VI.nii
visualqc/resources/atlases/mni_icbm152_nl_VI_nifti/icbm_avg_152_t1_tal_nlin_symmetric_VI_eye_mask.nii
visualqc/resources/atlases/mni_icbm152_nl_VI_nifti/icbm_avg_152_t1_tal_nlin_symmetric_VI_headmask.nii
visualqc/resources/atlases/mni_icbm152_nl_VI_nifti/icbm_avg_152_t1_tal_nlin_symmetric_VI_mask.nii
visualqc/tests/reg_to_mni.py
visualqc/tests/test_defacing.py
visualqc/tests/test_freesurfer_new_api.py
visualqc/tests/test_func_mri_qc.py
visualqc/tests/test_visualqc.py