INDIGOpy

• indigopy package
  • Submodules
  • indigopy.core module
    • classify()
    • featurize()
    • load_sample()
  • Module contents
• tests package
  • Submodules
  • tests.test_core module
    • TestClassify
      • TestClassify.classes
      • TestClassify.scores
      • TestClassify.test_classify_classes()
      • TestClassify.test_classify_default()
      • TestClassify.test_classify_thresholds()
      • TestClassify.thresholds
    • TestFeaturize
      • TestFeaturize.binarize
      • TestFeaturize.entropy
      • TestFeaturize.feature_names
      • TestFeaturize.interactions
      • TestFeaturize.key
      • TestFeaturize.na_handle
      • TestFeaturize.norm_method
      • TestFeaturize.normalize
      • TestFeaturize.orthology_map
      • TestFeaturize.profiles
      • TestFeaturize.profiles_alt
      • TestFeaturize.remove_zero_rows
      • TestFeaturize.silent
      • TestFeaturize.strains
      • TestFeaturize.test_featurize_binarize()
      • TestFeaturize.test_featurize_default()
      • TestFeaturize.test_featurize_entropy()
      • TestFeaturize.test_featurize_feature_names()
      • TestFeaturize.test_featurize_key_and_silent()
      • TestFeaturize.test_featurize_na_handle()
      • TestFeaturize.test_featurize_normalize_and_norm_method()
      • TestFeaturize.test_featurize_remove_zero_rows()
      • TestFeaturize.test_featurize_strains_and_orthology_map()
      • TestFeaturize.test_featurize_thresholds()
      • TestFeaturize.test_featurize_time_and_time_values()
      • TestFeaturize.thresholds
      • TestFeaturize.time
      • TestFeaturize.time_values
    • TestLoadSample
      • TestLoadSample.input1
      • TestLoadSample.input2
      • TestLoadSample.input3
      • TestLoadSample.input4
      • TestLoadSample.test_load_sample_abaumannii()
      • TestLoadSample.test_load_sample_ecoli()
      • TestLoadSample.test_load_sample_mtb()
      • TestLoadSample.test_load_sample_saureus()
  • Module contents