LICENSE
MANIFEST.in
README.rst
requirements.txt
setup.cfg
setup.py
ccsmeth/__init__.py
ccsmeth/_bam2modbam.py
ccsmeth/_call_modifications_txt.py
ccsmeth/_version.py
ccsmeth/align_hifi_reads.py
ccsmeth/call_hifi_reads.py
ccsmeth/call_modifications.py
ccsmeth/call_mods_freq_bam.py
ccsmeth/call_mods_freq_txt.py
ccsmeth/ccsmeth.py
ccsmeth/dataloader.py
ccsmeth/extract_features.py
ccsmeth/models.py
ccsmeth/train.py
ccsmeth/train_multigpu.py
ccsmeth.egg-info/PKG-INFO
ccsmeth.egg-info/SOURCES.txt
ccsmeth.egg-info/dependency_links.txt
ccsmeth.egg-info/entry_points.txt
ccsmeth.egg-info/not-zip-safe
ccsmeth.egg-info/requires.txt
ccsmeth.egg-info/top_level.txt
ccsmeth/utils/__init__.py
ccsmeth/utils/attention.py
ccsmeth/utils/constants_torch.py
ccsmeth/utils/lookahead.py
ccsmeth/utils/process_utils.py
ccsmeth/utils/ranger2020.py
ccsmeth/utils/ref_reader.py
ccsmeth/utils/sam2fastq_std.py