Welcome to pygor3’s documentation!

Table of Contents

• Readme
• Pygor Tutorial
• IgorModel
  • Bayesian Network
  • IgorModel_Parms
  • IgorModel_Marginals
  • DataArrays with parms and marginals
  • Conditional probabilities
  • Marginal Probabilities
  • Joint Probabilities
  • Editing a model
  • New models
    • Exporting a Model
  • Entropy
    • Mutual Information
    • Select events by probability
  • Use a default IGoR’s model to generate sequences
  • One sequence evaluation
• Evaluate VDJ model
  • Visualize scenarios
• Observables from scenarios
  • Predefine Functions for Scenarios
    • Pairwise Probabilities
    • Mutual Information from scenarios
    • Mean and Variance of values in scenarios dataframe