Metadata-Version: 2.1
Name: pysam
Version: 0.18.0
Summary: pysam
Home-page: https://github.com/pysam-developers/pysam
Author: Andreas Heger
Author-email: andreas.heger@gmail.com
License: MIT
Platform: POSIX
Platform: UNIX
Platform: MacOS
Classifier: Development Status :: 4 - Beta
Classifier: Intended Audience :: Science/Research
Classifier: Intended Audience :: Developers
Classifier: License :: OSI Approved
Classifier: Programming Language :: Python
Classifier: Topic :: Software Development
Classifier: Topic :: Scientific/Engineering
Classifier: Operating System :: POSIX
Classifier: Operating System :: Unix
Classifier: Operating System :: MacOS
Requires: cython (>=0.29.12)
License-File: COPYING
License-File: AUTHORS

pysam - a python module for reading, manipulating and writing
genomic data sets.

pysam is a lightweight wrapper of the htslib C-API and provides
facilities to read and write SAM/BAM/VCF/BCF/BED/GFF/GTF/FASTA/FASTQ
files as well as access to the command line functionality of the
samtools and bcftools packages. The module supports compression and
random access through indexing.

This module provides a low-level wrapper around the htslib C-API as
using cython and a high-level API for convenient access to the data
within standard genomic file formats.

See:
http://www.htslib.org
https://github.com/pysam-developers/pysam
http://pysam.readthedocs.org/en/stable



