setup.py
test/__init__.py
test/benchmark_vcf_load.py
test/common.py
test/data.py
test/read_evidence_performance.py
test/test_collection_base_class.py
test/test_collection_filtering.py
test/test_common.py
test/test_cosmic_mutations.py
test/test_dbnsfp_validation.py
test/test_effect_classes.py
test/test_maf.py
test/test_mouse.py
test/test_mutate.py
test/test_no_duplicate_variants.py
test/test_problematic_variants.py
test/test_read_evidence.py
test/test_string_helpers.py
test/test_timings.py
test/test_variant.py
test/test_variant_collection.py
test/test_vcf.py
varcode/__init__.py
varcode/coding_effect.py
varcode/collection.py
varcode/common.py
varcode/cufflinks.py
varcode/effect_collection.py
varcode/effect_helpers.py
varcode/effect_ordering.py
varcode/effects.py
varcode/frameshift_coding_effect.py
varcode/in_frame_coding_effect.py
varcode/locus.py
varcode/maf.py
varcode/mutant_protein.py
varcode/mutate.py
varcode/nucleotides.py
varcode/reference_name.py
varcode/string_helpers.py
varcode/todo_effect.py
varcode/transcript_helpers.py
varcode/translate.py
varcode/util.py
varcode/variant.py
varcode/variant_collection.py
varcode/vcf.py
varcode.egg-info/PKG-INFO
varcode.egg-info/SOURCES.txt
varcode.egg-info/dependency_links.txt
varcode.egg-info/pbr.json
varcode.egg-info/requires.txt
varcode.egg-info/top_level.txt
varcode/read_evidence/__init__.py
varcode/read_evidence/pileup.py
varcode/read_evidence/pileup_collection.py
varcode/read_evidence/pileup_element.py
varcode/read_evidence/util.py