Overview
Installation
Required database
External softwares
Basic requirements
Acknowledgements
Tutorial:
Pre-processing
Filtering
BCR clustering and visualization
Running from R
API:
Preprocessing:
pp
Preprocessing (external):
pp.external
Tools:
tl
Plotting:
pl
Utilities:
utl
dandelion.utilities.makeblastdb
dandelion.utilities.load_data
dandelion.utilities.Dandelion
dandelion.utilities.update_metadata
dandelion.utilities.read_h5
dandelion.utilities.read_pkl
dandelion
»
Preprocessing:
pp
»
dandelion.utilities.makeblastdb
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dandelion.utilities.makeblastdb
¶
dandelion.utilities.
makeblastdb
(
ref
)
[source]
¶
Runs makeblastdb.
Parameters
ref
– fasta file