.pre-commit-config.yaml
CHANGELOG.md
CODE_OF_CONDUCT.md
CONTRIBUTING.md
LICENSE
README.md
mkdocs.yml
pyproject.toml
setup.cfg
setup.py
.github/workflows/docs.yml
.github/workflows/lint.yml
.github/workflows/publish.yml
.github/workflows/tests.yml
data/TMT10-Trial-8.mgf
data/TMT10-Trial-8.mzML
data/TMT10-Trial-8.mzXML
depthcharge/__init__.py
depthcharge/masses.py
depthcharge/similarity.py
depthcharge/utils.py
depthcharge/version.py
depthcharge/components/__init__.py
depthcharge/components/encoders.py
depthcharge/components/feedforward.py
depthcharge/components/mixins.py
depthcharge/components/transformers.py
depthcharge/data/__init__.py
depthcharge/data/datasets.py
depthcharge/data/hdf5.py
depthcharge/data/loaders.py
depthcharge/data/parsers.py
depthcharge/data/preprocessing.py
depthcharge/models/__init__.py
depthcharge/models/denovo/__init__.py
depthcharge/models/denovo/model.py
depthcharge_ms.egg-info/PKG-INFO
depthcharge_ms.egg-info/SOURCES.txt
depthcharge_ms.egg-info/dependency_links.txt
depthcharge_ms.egg-info/entry_points.txt
depthcharge_ms.egg-info/requires.txt
depthcharge_ms.egg-info/top_level.txt
docs/README.md
docs/static
docs/stylesheets/extra.css
static/icon.svg
static/logo-dark.png
static/logo-light.png
tests/conftest.py
tests/unit_tests/test_denovo.py
tests/unit_tests/test_masses.py
tests/unit_tests/test_components/test_transformers.py
tests/unit_tests/test_data/test_datasets.py
tests/unit_tests/test_data/test_index.py
tests/unit_tests/test_data/test_loaders.py