Metadata-Version: 1.2
Name: scipion-em-warp
Version: 3.0.0b2
Summary: Plugin to use Warp within the Scipion framework
Home-page: https://github.com/scipion-em/scipion-em-warp
Author: Grigory Sharov
Author-email: sharov.grigory@gmail.com
License: UNKNOWN
Project-URL: Bug Reports, https://github.com/scipion-em/scipion-em-warp/issues
Project-URL: Source, https://github.com/scipion-em/scipion-em-warp/
Description: ===========
        Warp plugin
        ===========
        
        This plugin provides a wrapper for some of the programs of the `Warp <https://github.com/dtegunov/warp>`_ software.
        
        .. image:: https://img.shields.io/pypi/v/scipion-em-warp.svg
                :target: https://pypi.python.org/pypi/scipion-em-warp
                :alt: PyPI release
        
        .. image:: https://img.shields.io/pypi/l/scipion-em-warp.svg
                :target: https://pypi.python.org/pypi/scipion-em-warp
                :alt: License
        
        .. image:: https://img.shields.io/pypi/pyversions/scipion-em-warp.svg
                :target: https://pypi.python.org/pypi/scipion-em-warp
                :alt: Supported Python versions
        
        .. image:: https://img.shields.io/sonar/quality_gate/scipion-em_scipion-em-warp?server=https%3A%2F%2Fsonarcloud.io
                :target: https://sonarcloud.io/dashboard?id=scipion-em_scipion-em-warp
                :alt: SonarCloud quality gate
        
        .. image:: https://img.shields.io/pypi/dm/scipion-em-warp
                :target: https://pypi.python.org/pypi/scipion-em-warp
                :alt: Downloads
        
        Installation
        -------------
        
        You will need to use 3.0+ version of Scipion to be able to run these protocols. To install the plugin, you have two options:
        
        a) Stable version
        
        .. code-block::
        
           scipion installp -p scipion-em-warp
        
        b) Developer's version
        
           * download repository
        
            .. code-block::
        
                git clone -b devel https://github.com/scipion-em/scipion-em-warp.git
        
           * install
        
            .. code-block::
        
               scipion installp -p /path/to/scipion-em-warp --devel
        
        
        Verifying
        ---------
        
        To check the installation, simply run one of the following Scipion tests:
        
        * scipion tests warp.tests.test_protocols.TestDeconvolve2D
        * scipion tests warp.tests.test_protocols_tomo.TestDeconvolve3D
        
        Protocols
        ----------
        
        * deconvolution 2D
        * deconvolution 3D
        
        References
        -----------
        
        1. Dimitry Tegunov and Patrick Cramer. Real-time cryo-electron microscopy data preprocessing with Warp. Nature Methods 16(11), 2019, p. 1146-1152.
        
Keywords: scipion electron-microscopy cryo-em structural-biology image-processing scipion-3.0
Platform: UNKNOWN
Classifier: Development Status :: 4 - Beta
Classifier: License :: OSI Approved :: GNU General Public License v3 (GPLv3)
Classifier: Programming Language :: Python :: 3
