AUTHORS.rst
CONTRIBUTING.rst
HISTORY.rst
LICENSE
MANIFEST.in
README.rst
setup.cfg
setup.py
bond/__init__.py
bond/bond.py
bond/cli.py
bond/config.py
bond/constants.py
bond/metadata_merge.py
bond/validator.py
bond/testdata/complete/README
bond/testdata/complete/dataset_description.json
bond/testdata/complete/sub-01/ses-phdiff/anat/sub-01_ses-phdiff_T1w.json
bond/testdata/complete/sub-01/ses-phdiff/anat/sub-01_ses-phdiff_T1w.nii.gz
bond/testdata/complete/sub-01/ses-phdiff/dwi/sub-01_ses-phdiff_acq-HASC55AP_dwi.bval
bond/testdata/complete/sub-01/ses-phdiff/dwi/sub-01_ses-phdiff_acq-HASC55AP_dwi.bvec
bond/testdata/complete/sub-01/ses-phdiff/dwi/sub-01_ses-phdiff_acq-HASC55AP_dwi.json
bond/testdata/complete/sub-01/ses-phdiff/dwi/sub-01_ses-phdiff_acq-HASC55AP_dwi.nii.gz
bond/testdata/complete/sub-01/ses-phdiff/fmap/sub-01_ses-phdiff_acq-v4_magnitude1.json
bond/testdata/complete/sub-01/ses-phdiff/fmap/sub-01_ses-phdiff_acq-v4_magnitude1.nii.gz
bond/testdata/complete/sub-01/ses-phdiff/fmap/sub-01_ses-phdiff_acq-v4_magnitude2.json
bond/testdata/complete/sub-01/ses-phdiff/fmap/sub-01_ses-phdiff_acq-v4_magnitude2.nii.gz
bond/testdata/complete/sub-01/ses-phdiff/fmap/sub-01_ses-phdiff_acq-v4_phasediff.json
bond/testdata/complete/sub-01/ses-phdiff/fmap/sub-01_ses-phdiff_acq-v4_phasediff.nii.gz
bond/testdata/complete/sub-01/ses-phdiff/fmap/sub-01_ses-phdiff_dir-PA_epi.json
bond/testdata/complete/sub-01/ses-phdiff/fmap/sub-01_ses-phdiff_dir-PA_epi.nii.gz
bond/testdata/complete/sub-01/ses-phdiff/func/sub-01_ses-phdiff_task-rest_bold.json
bond/testdata/complete/sub-01/ses-phdiff/func/sub-01_ses-phdiff_task-rest_bold.nii.gz
bond/testdata/complete/sub-02/ses-phdiff/anat/sub-02_ses-phdiff_T1w.json
bond/testdata/complete/sub-02/ses-phdiff/anat/sub-02_ses-phdiff_T1w.nii.gz
bond/testdata/complete/sub-02/ses-phdiff/dwi/sub-02_ses-phdiff_acq-HASC55AP_dwi.bval
bond/testdata/complete/sub-02/ses-phdiff/dwi/sub-02_ses-phdiff_acq-HASC55AP_dwi.bvec
bond/testdata/complete/sub-02/ses-phdiff/dwi/sub-02_ses-phdiff_acq-HASC55AP_dwi.json
bond/testdata/complete/sub-02/ses-phdiff/dwi/sub-02_ses-phdiff_acq-HASC55AP_dwi.nii.gz
bond/testdata/complete/sub-02/ses-phdiff/fmap/sub-02_ses-phdiff_acq-v4_magnitude1.json
bond/testdata/complete/sub-02/ses-phdiff/fmap/sub-02_ses-phdiff_acq-v4_magnitude1.nii.gz
bond/testdata/complete/sub-02/ses-phdiff/fmap/sub-02_ses-phdiff_acq-v4_magnitude2.json
bond/testdata/complete/sub-02/ses-phdiff/fmap/sub-02_ses-phdiff_acq-v4_magnitude2.nii.gz
bond/testdata/complete/sub-02/ses-phdiff/fmap/sub-02_ses-phdiff_acq-v4_phasediff.json
bond/testdata/complete/sub-02/ses-phdiff/fmap/sub-02_ses-phdiff_acq-v4_phasediff.nii.gz
bond/testdata/complete/sub-02/ses-phdiff/fmap/sub-02_ses-phdiff_dir-PA_epi.json
bond/testdata/complete/sub-02/ses-phdiff/fmap/sub-02_ses-phdiff_dir-PA_epi.nii.gz
bond/testdata/complete/sub-02/ses-phdiff/func/sub-02_ses-phdiff_task-rest_bold.json
bond/testdata/complete/sub-02/ses-phdiff/func/sub-02_ses-phdiff_task-rest_bold.nii.gz
bond/testdata/complete/sub-03/ses-phdiff/anat/sub-03_ses-phdiff_T1w.json
bond/testdata/complete/sub-03/ses-phdiff/anat/sub-03_ses-phdiff_T1w.nii.gz
bond/testdata/complete/sub-03/ses-phdiff/dwi/sub-03_ses-phdiff_acq-HASC55AP_dwi.bval
bond/testdata/complete/sub-03/ses-phdiff/dwi/sub-03_ses-phdiff_acq-HASC55AP_dwi.bvec
bond/testdata/complete/sub-03/ses-phdiff/dwi/sub-03_ses-phdiff_acq-HASC55AP_dwi.json
bond/testdata/complete/sub-03/ses-phdiff/dwi/sub-03_ses-phdiff_acq-HASC55AP_dwi.nii.gz
bond/testdata/complete/sub-03/ses-phdiff/fmap/sub-03_ses-phdiff_acq-v4_magnitude1.json
bond/testdata/complete/sub-03/ses-phdiff/fmap/sub-03_ses-phdiff_acq-v4_magnitude1.nii.gz
bond/testdata/complete/sub-03/ses-phdiff/fmap/sub-03_ses-phdiff_acq-v4_magnitude2.json
bond/testdata/complete/sub-03/ses-phdiff/fmap/sub-03_ses-phdiff_acq-v4_magnitude2.nii.gz
bond/testdata/complete/sub-03/ses-phdiff/fmap/sub-03_ses-phdiff_acq-v4_phasediff.json
bond/testdata/complete/sub-03/ses-phdiff/fmap/sub-03_ses-phdiff_acq-v4_phasediff.nii.gz
bond/testdata/complete/sub-03/ses-phdiff/fmap/sub-03_ses-phdiff_dir-PA_epi.json
bond/testdata/complete/sub-03/ses-phdiff/fmap/sub-03_ses-phdiff_dir-PA_epi.nii.gz
bond/testdata/complete/sub-03/ses-phdiff/func/sub-03_ses-phdiff_task-rest_bold.json
bond/testdata/complete/sub-03/ses-phdiff/func/sub-03_ses-phdiff_task-rest_bold.nii.gz
bond/testdata/inconsistent/README
bond/testdata/inconsistent/dataset_description.json
bond/testdata/inconsistent/sub-01/ses-phdiff/anat/sub-01_ses-phdiff_T1w.json
bond/testdata/inconsistent/sub-01/ses-phdiff/anat/sub-01_ses-phdiff_T1w.nii.gz
bond/testdata/inconsistent/sub-01/ses-phdiff/dwi/sub-01_ses-phdiff_acq-HASC55AP_dwi.bval
bond/testdata/inconsistent/sub-01/ses-phdiff/dwi/sub-01_ses-phdiff_acq-HASC55AP_dwi.bvec
bond/testdata/inconsistent/sub-01/ses-phdiff/dwi/sub-01_ses-phdiff_acq-HASC55AP_dwi.json
bond/testdata/inconsistent/sub-01/ses-phdiff/dwi/sub-01_ses-phdiff_acq-HASC55AP_dwi.nii.gz
bond/testdata/inconsistent/sub-01/ses-phdiff/fmap/sub-01_ses-phdiff_acq-v4_magnitude1.json
bond/testdata/inconsistent/sub-01/ses-phdiff/fmap/sub-01_ses-phdiff_acq-v4_magnitude1.nii.gz
bond/testdata/inconsistent/sub-01/ses-phdiff/fmap/sub-01_ses-phdiff_acq-v4_magnitude2.json
bond/testdata/inconsistent/sub-01/ses-phdiff/fmap/sub-01_ses-phdiff_acq-v4_magnitude2.nii.gz
bond/testdata/inconsistent/sub-01/ses-phdiff/fmap/sub-01_ses-phdiff_acq-v4_phasediff.json
bond/testdata/inconsistent/sub-01/ses-phdiff/fmap/sub-01_ses-phdiff_acq-v4_phasediff.nii.gz
bond/testdata/inconsistent/sub-01/ses-phdiff/fmap/sub-01_ses-phdiff_dir-PA_epi.json
bond/testdata/inconsistent/sub-01/ses-phdiff/fmap/sub-01_ses-phdiff_dir-PA_epi.nii.gz
bond/testdata/inconsistent/sub-01/ses-phdiff/func/sub-01_ses-phdiff_task-rest_bold.json
bond/testdata/inconsistent/sub-01/ses-phdiff/func/sub-01_ses-phdiff_task-rest_bold.nii.gz
bond/testdata/inconsistent/sub-02/ses-phdiff/anat/sub-02_ses-phdiff_T1w.json
bond/testdata/inconsistent/sub-02/ses-phdiff/anat/sub-02_ses-phdiff_T1w.nii.gz
bond/testdata/inconsistent/sub-02/ses-phdiff/dwi/sub-02_ses-phdiff_acq-HASC55AP_dwi.bval
bond/testdata/inconsistent/sub-02/ses-phdiff/dwi/sub-02_ses-phdiff_acq-HASC55AP_dwi.bvec
bond/testdata/inconsistent/sub-02/ses-phdiff/dwi/sub-02_ses-phdiff_acq-HASC55AP_dwi.json
bond/testdata/inconsistent/sub-02/ses-phdiff/dwi/sub-02_ses-phdiff_acq-HASC55AP_dwi.nii.gz
bond/testdata/inconsistent/sub-02/ses-phdiff/fmap/sub-02_ses-phdiff_acq-v4_magnitude1.json
bond/testdata/inconsistent/sub-02/ses-phdiff/fmap/sub-02_ses-phdiff_acq-v4_magnitude1.nii.gz
bond/testdata/inconsistent/sub-02/ses-phdiff/fmap/sub-02_ses-phdiff_acq-v4_magnitude2.json
bond/testdata/inconsistent/sub-02/ses-phdiff/fmap/sub-02_ses-phdiff_acq-v4_magnitude2.nii.gz
bond/testdata/inconsistent/sub-02/ses-phdiff/fmap/sub-02_ses-phdiff_acq-v4_phasediff.json
bond/testdata/inconsistent/sub-02/ses-phdiff/fmap/sub-02_ses-phdiff_acq-v4_phasediff.nii.gz
bond/testdata/inconsistent/sub-02/ses-phdiff/fmap/sub-02_ses-phdiff_dir-PA_epi.json
bond/testdata/inconsistent/sub-02/ses-phdiff/fmap/sub-02_ses-phdiff_dir-PA_epi.nii.gz
bond/testdata/inconsistent/sub-02/ses-phdiff/func/sub-02_ses-phdiff_task-rest_bold.json
bond/testdata/inconsistent/sub-02/ses-phdiff/func/sub-02_ses-phdiff_task-rest_bold.nii.gz
bond/testdata/inconsistent/sub-03/ses-phdiff/anat/sub-03_ses-phdiff_T1w.json
bond/testdata/inconsistent/sub-03/ses-phdiff/anat/sub-03_ses-phdiff_T1w.nii.gz
bond/testdata/inconsistent/sub-03/ses-phdiff/dwi/sub-03_ses-phdiff_acq-HASC55AP_dwi.bval
bond/testdata/inconsistent/sub-03/ses-phdiff/dwi/sub-03_ses-phdiff_acq-HASC55AP_dwi.bvec
bond/testdata/inconsistent/sub-03/ses-phdiff/dwi/sub-03_ses-phdiff_acq-HASC55AP_dwi.json
bond/testdata/inconsistent/sub-03/ses-phdiff/dwi/sub-03_ses-phdiff_acq-HASC55AP_dwi.nii.gz
bond/testdata/inconsistent/sub-03/ses-phdiff/fmap/sub-03_ses-phdiff_acq-v4_magnitude1.json
bond/testdata/inconsistent/sub-03/ses-phdiff/fmap/sub-03_ses-phdiff_acq-v4_magnitude1.nii.gz
bond/testdata/inconsistent/sub-03/ses-phdiff/fmap/sub-03_ses-phdiff_acq-v4_magnitude2.json
bond/testdata/inconsistent/sub-03/ses-phdiff/fmap/sub-03_ses-phdiff_acq-v4_magnitude2.nii.gz
bond/testdata/inconsistent/sub-03/ses-phdiff/fmap/sub-03_ses-phdiff_acq-v4_phasediff.json
bond/testdata/inconsistent/sub-03/ses-phdiff/fmap/sub-03_ses-phdiff_acq-v4_phasediff.nii.gz
bond/testdata/inconsistent/sub-03/ses-phdiff/fmap/sub-03_ses-phdiff_dir-PA_epi.json
bond/testdata/inconsistent/sub-03/ses-phdiff/fmap/sub-03_ses-phdiff_dir-PA_epi.nii.gz
bond/testdata/inconsistent/sub-03/ses-phdiff/func/sub-03_ses-phdiff_task-rest_bold.json
bond/testdata/inconsistent/sub-03/ses-phdiff/func/sub-03_ses-phdiff_task-rest_bold.nii.gz
cubids_bond_fork.egg-info/PKG-INFO
cubids_bond_fork.egg-info/SOURCES.txt
cubids_bond_fork.egg-info/dependency_links.txt
cubids_bond_fork.egg-info/entry_points.txt
cubids_bond_fork.egg-info/not-zip-safe
cubids_bond_fork.egg-info/requires.txt
cubids_bond_fork.egg-info/top_level.txt
docs/Makefile
docs/authors.rst
docs/conf.py
docs/contributing.rst
docs/history.rst
docs/index.rst
docs/installation.rst
docs/make.bat
docs/readme.rst
docs/usage.rst
tests/test_bond.py