Metadata-Version: 2.1
Name: napping
Version: 0.1.7
Summary: Control point mapping and coordination transformation using napari
Home-page: https://github.com/BodenmillerGroup/napping
Author: Jonas Windhager
Author-email: jonas.windhager@uzh.ch
License: MIT
Description: # napping
        
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        Control point mapping and coordination transformation using napari
        
        ## Requirements
        
        This package requires Python 3.7 or newer.
        
        Python package dependencies are listed in [requirements.txt](https://github.com/BodenmillerGroup/napping/blob/main/requirements.txt).
        
        Using virtual environments is strongly recommended.
        
        ## Installation
        
        Install napping and its dependencies with:
        
            pip install napping
        
        ### Environment setup example: mapping IMC and slidescanner images
        
        As napari is under active development, the use of virtual environments is strongly encouraged. For example, to set up an environment for aligning Imaging Mass Cytometry (IMC, .mcd/.txt) and bright-field/immunofluorescence slidescanner (.czi) images:
        
            conda create -n napping python
            conda activate napping
            pip install napping napari-imc napari-czifile2
        
        Afterwards, napping can be started from inside the environment:
        
            napping
        
        ## Usage
        
        Use `napping` for control point mapping and coordinate transformation
        
        ## Authors
        
        Created and maintained by Jonas Windhager [jonas.windhager@uzh.ch](mailto:jonas.windhager@uzh.ch)
        
        ## Contributing
        
        [Contributing](https://github.com/BodenmillerGroup/napping/blob/main/CONTRIBUTING.md)
        
        ## Changelog
        
        [Changelog](https://github.com/BodenmillerGroup/napping/blob/main/CHANGELOG.md)
        
        ## License
        
        [MIT](https://github.com/BodenmillerGroup/napping/blob/main/LICENSE.md)
        
Platform: UNKNOWN
Classifier: Intended Audience :: Science/Research
Classifier: License :: OSI Approved :: MIT License
Classifier: Natural Language :: English
Classifier: Operating System :: OS Independent
Classifier: Programming Language :: Python :: 3.7
Classifier: Programming Language :: Python :: 3.8
Classifier: Programming Language :: Python :: 3.9
Classifier: Topic :: Scientific/Engineering :: Bio-Informatics
Classifier: Topic :: Scientific/Engineering :: Image Processing
Classifier: Development Status :: 4 - Beta
Classifier: Framework :: napari
Requires-Python: >=3.7
Description-Content-Type: text/markdown
