Metadata-Version: 1.1
Name: scipion-em-resmap
Version: 3.0.1
Summary: Plugin to use ResMap program within the Scipion framework
Home-page: https://github.com/scipion-em/scipion-em-resmap
Author: I2PC
Author-email: scipion@cnb.csic.es
License: UNKNOWN
Description: =============
        Resmap plugin
        =============
        
        This plugin provides a wrapper for `ResMap program <https://sourceforge.net/projects/resmap-latest>`_.
        
        .. figure:: http://scipion-test.cnb.csic.es:9980/badges/resmap_devel.svg
           :align: left
           :alt: build status
        
        Installation
        ------------
        
        You will need to use `3.0 <https://github.com/I2PC/scipion/releases/tag/V2.0.0>`_ version of Scipion to be able to run these protocols. To install the plugin, you have two options:
        
        a) Stable version
        
        .. code-block::
        
            scipion installp -p scipion-em-resmap
        
        b) Developer's version
        
            * download repository
        
            .. code-block::
        
                git clone https://github.com/scipion-em/scipion-em-resmap.git
        
            * install
        
            .. code-block::
        
                scipion installp -p path_to_scipion-em-resmap --devel
        
        ResMap binaries will be installed automatically with the plugin, but you can also link an existing installation.
        Default installation path assumed is ``software/em/resmap-1.95``, if you want to change it, set *RESMAP_HOME* in ``scipion.conf`` file pointing to the folder where the ResMap is installed. ResMap binary (default ResMap-1.95-cuda-Centos7x64) and CUDA lib module (default ResMap_krnl-cuda-V8.0.61-sm60_gpu.so) can be set by *RESMAP* and *RESMAP_GPU_LIB* vars, respectively.
        
        To check the installation, simply run the following Scipion test: ``scipion test resmap.tests.test_protocols_resmap.TestResMap``
        
        A complete list of tests can also be seen by executing ``scipion test --show --grep resmap``
        
        Supported versions
        ------------------
        
        1.95
        
        Protocols
        ---------
        
        * local resolution
        
        References
        ----------
        
        1. Kucukelbir A. et al. (2014) Quantifying the local resolution of cryo-EM density maps. Nature Methods 11, 63-65.
        
Keywords: scipion electron-microscopy cryo-em structural-biology image-processing scipion-3.0
Platform: UNKNOWN
Classifier: Development Status :: 4 - Beta
Classifier: License :: OSI Approved :: GNU General Public License v3 (GPLv3)
Classifier: Programming Language :: Python :: 3
