Display a Phylogenetic Tree with a Circular Dendrogram Style

from cogent3.app import io


reader = io.load_json()

ens_tree = reader("../../data/GN-tree.json")
fig = ens_tree.get_figure("circular", width=600, height=600)
fig.show()

Colouring a set of edges

fig.style_edges("AfricanEl", tip2="Manatee", legendgroup="Afrotheria",
                line=dict(color="magenta", width=2))
fig.show()

With Contemporaneous Tips

fig.contemporaneous = True
fig.label_pad = 0.23
# sphinx_gallery_thumbnail_number = 3
fig.show(width=550, height=500)