Metadata-Version: 1.1
Name: pyannotables
Version: 0.5
Summary: Python package for conversions between ENSEMBL IDs and gene names (annotables + pyensembl)
Home-page: https://github.com/gokceneraslan/pyannotables
Author: Gokcen Eraslan
Author-email: geraslan@broadinstitute.org
License: Apache Software License 2.0
Description: ============
        pyannotables
        ============
        
        
        .. image:: https://img.shields.io/pypi/v/pyannotables.svg
                :target: https://pypi.python.org/pypi/pyannotables
        
        
        Python package for conversions between Ensembl IDs and gene names (annotables + pyranges + Ensembl GTF files)
        
        * Free software: Apache Software License 2.0
        
        
        Installation
        ------------
        
        * `pip install pyannotables`
        
        
        Features
        --------
        
        .. image:: notebook.png
           :scale: 30 %
        
           
        Building data frames
        ---------------------
        
        See `./build.ipynb
        <https://nbviewer.ipython.org/github/gokceneraslan/pyannotables/blob/master/build.ipynb>`_.
        
        
        Changelog
        ---------
        
        * v0.5: Homology mapping table and function (`homology_convert`) are added. tables is a function now.
        * v0.4: Entrez and UNIPROT IDs are added.
        * v0.3: Ensembl version updated to 100. NCBI transcript IDs, gene lengths and gene exon lengths are added.
        
        
        Credits
        -------
        
        * `annotables package in R` https://github.com/stephenturner/annotables
        * `audreyr/cookiecutter-pypackage`: https://github.com/audreyr/cookiecutter-pypackage
        
        
        =======
        History
        =======
        
        
        v0.5 (2020-10-29)
        -----------------
        
        * Homology mapping table and function (`homology_convert`) are added.
        * tables is now a function.
        
        
        v0.4 (2020-10-27)
        -----------------
        
        * Entrez and UNIPROT IDs are added.
        
        
        v0.3 (2020-06-04)
        -----------------
        
        * Ensembl version updated to 100. NCBI transcript IDs, gene lengths and gene exon lengths are added.
        
        
        v0.1 (2019-04-07)
        ------------------
        
        * First release on PyPI.
        
Keywords: pyannotables
Platform: UNKNOWN
Classifier: Development Status :: 2 - Pre-Alpha
Classifier: Intended Audience :: Developers
Classifier: License :: OSI Approved :: Apache Software License
Classifier: Natural Language :: English
Classifier: Programming Language :: Python :: 3.5
Classifier: Programming Language :: Python :: 3.6
Classifier: Programming Language :: Python :: 3.7
