README.md
setup.cfg
setup.py
dosma/__init__.py
dosma/app.py
dosma/cli.py
dosma/defaults.py
dosma/file_constants.py
dosma/quant_vals.py
dosma.egg-info/PKG-INFO
dosma.egg-info/SOURCES.txt
dosma.egg-info/dependency_links.txt
dosma.egg-info/requires.txt
dosma.egg-info/top_level.txt
dosma/data_io/__init__.py
dosma/data_io/dicom_io.py
dosma/data_io/format_io.py
dosma/data_io/format_io_utils.py
dosma/data_io/med_volume.py
dosma/data_io/nifti_io.py
dosma/data_io/orientation.py
dosma/gui/__init__.py
dosma/gui/dosma_gui.py
dosma/gui/gui_errors.py
dosma/gui/im_viewer.py
dosma/gui/ims.py
dosma/gui/preferences_viewer.py
dosma/gui/gui_utils/__init__.py
dosma/gui/gui_utils/console_output.py
dosma/gui/gui_utils/filedialog_reader.py
dosma/gui/gui_utils/gui_utils.py
dosma/models/__init__.py
dosma/models/oaiunet2d.py
dosma/models/seg_model.py
dosma/models/util.py
dosma/msk/__init__.py
dosma/msk/knee.py
dosma/resources/preferences.yml
dosma/resources/elastix/params/parameters-affine-interregister.txt
dosma/resources/elastix/params/parameters-affine.txt
dosma/resources/elastix/params/parameters-bspline.txt
dosma/resources/elastix/params/parameters-rigid-interregister.txt
dosma/resources/elastix/params/parameters-rigid.txt
dosma/resources/templates/.preferences.yml
dosma/resources/templates/.preferences_cmd_line_schema.yml
dosma/scan_sequences/__init__.py
dosma/scan_sequences/cones.py
dosma/scan_sequences/cube_quant.py
dosma/scan_sequences/mapss.py
dosma/scan_sequences/qdess.py
dosma/scan_sequences/scans.py
dosma/tissues/__init__.py
dosma/tissues/femoral_cartilage.py
dosma/tissues/meniscus.py
dosma/tissues/patellar_cartilage.py
dosma/tissues/tibial_cartilage.py
dosma/tissues/tissue.py
dosma/utils/__init__.py
dosma/utils/cmd_line_utils.py
dosma/utils/fits.py
dosma/utils/geometry_utils.py
dosma/utils/img_utils.py
dosma/utils/io_utils.py
dosma/utils/registration.py
py_scripts/bilateral_nii_to_mat.py
py_scripts/gait_retraining_nii_to_mat.py
tests/models/__init__.py
tests/models/test_oaiunet2d.py
tests/models/test_util.py
tests/scan_sequences/__init__.py
tests/scan_sequences/test_cones.py
tests/scan_sequences/test_cubequant.py
tests/scan_sequences/test_mapss.py
tests/scan_sequences/test_qdess.py
tests/utils/__init__.py
tests/utils/test_fitting.py
tests/utils/test_io_utils.py
tests/utils/test_registration.py