Metadata-Version: 2.1
Name: paquo
Version: 0.3.0
Summary: library for interacting with QuPath
Home-page: https://github.com/bayer-science-for-a-better-life/paquo
Author: Santiago Villalba, Andreas Poehlmann
Author-email: santiago.villalba@bayer.com, andreas.poehlmann@bayer.com
License: GPLv3
Download-URL: https://github.com/bayer-science-for-a-better-life/paquo
Description: # PAQUO: PAthological QUpath Obsession
        
        [![PyPI Version](https://img.shields.io/pypi/v/paquo)](https://pypi.org/project/paquo/)
        [![Read the Docs](https://img.shields.io/readthedocs/paquo)](https://paquo.readthedocs.io)
        [![GitHub Workflow Status](https://img.shields.io/github/workflow/status/bayer-science-for-a-better-life/paquo/paquo%20ci?label=tests)](https://github.com/bayer-science-for-a-better-life/paquo/actions)
        [![Codecov](https://img.shields.io/codecov/c/github/bayer-science-for-a-better-life/paquo)](https://codecov.io/gh/bayer-science-for-a-better-life/paquo)
        [![PyPI - Python Version](https://img.shields.io/pypi/pyversions/paquo)](https://github.com/bayer-science-for-a-better-life/paquo)
        [![GitHub issues](https://img.shields.io/github/issues/bayer-science-for-a-better-life/paquo)](https://github.com/bayer-science-for-a-better-life/paquo/issues)
        
        Welcome to `paquo` :wave:, a library for interacting with [QuPath](https://qupath.github.io/)
        from [Python](https://www.python.org/).
        
        `paquo`'s goal is to provide a pythonic interface to important features of
        QuPath, and to make creating and working with QuPath projects intuitive for
        Python programmers.
        
        We strive to make your lives as easy as possible: If `paquo` is not pythonic,
        unintuitive, slow or if its documentation is confusing, it's a bug in
        `paquo`. Feel free to report any issues or feature requests in the issue
        tracker!
        
        Development 
        [happens on github](https://github.com/bayer-science-for-a-better-life/paquo)
        :octocat:
        
        ## Documentation
        
        You can find `paquo`'s documentation at
        [paquo.readthedocs.io](https://paquo.readthedocs.io) :heart:
        
        
        ## Development Installation
        
        1. Install conda and git
        2. Clone paquo `git clone https://github.com/bayer-science-for-a-better-life/paquo.git`
        3. Run `conda env create -f environment.yaml`
        4. Activate the environment `conda activate paquo`
        
        Note that in this environment `paquo` is already installed in development mode,
        so go ahead and hack.
        
        
        ## Contributing Guidelines
        
        - Please follow [pep-8 conventions](https://www.python.org/dev/peps/pep-0008/) but:
          - We allow 120 character long lines (try anyway to keep them short)
        - Please use [numpy docstrings](https://numpydoc.readthedocs.io/en/latest/format.html#docstring-standard).
        - When contributing code, please try to use Pull Requests.
        - tests go hand in hand with modules on ```tests``` packages at the same level. We use ```pytest```.
        
        You can setup your IDE to help you adhering to these guidelines.
        <br>
        _([Santi](https://github.com/sdvillal) is happy to help you setting up pycharm in 5 minutes)_
        
        
        ## Acknowledgements
        
        Build with love by Andreas Poehlmann and Santi Villalba from the _Machine
        Learning Research_ group at Bayer. In collaboration with the _Pathology Lab 2_
        and the _Mechanistic and Toxicologic Pathology_ group.
        
        `paquo`: copyright 2020 Bayer AG, licensed under [GPL-3.0](https://github.com/bayer-science-for-a-better-life/paquo/blob/master/LICENSE)
        
Platform: UNKNOWN
Classifier: Development Status :: 3 - Alpha
Classifier: Intended Audience :: Science/Research
Classifier: License :: OSI Approved :: GNU General Public License v3 (GPLv3)
Classifier: Programming Language :: Java
Classifier: Programming Language :: Python
Classifier: Programming Language :: Python :: 3 :: Only
Classifier: Programming Language :: Python :: 3.6
Classifier: Programming Language :: Python :: 3.7
Classifier: Programming Language :: Python :: 3.8
Classifier: Topic :: Scientific/Engineering
Classifier: Topic :: Scientific/Engineering :: Visualization
Classifier: Topic :: Scientific/Engineering :: Information Analysis
Classifier: Topic :: Scientific/Engineering :: Bio-Informatics
Classifier: Topic :: Utilities
Classifier: Operating System :: Microsoft :: Windows
Classifier: Operating System :: POSIX
Classifier: Operating System :: Unix
Classifier: Operating System :: MacOS
Requires-Python: >=3.6.1
Description-Content-Type: text/markdown
Provides-Extra: dev
Provides-Extra: docs
